Thioflavicoccus mobilis: Thimo_2592
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Entry
Thimo_2592 CDS
T02397
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03030
DNA replication
tmb03410
Base excision repair
tmb03420
Nucleotide excision repair
tmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thimo_2592
03410 Base excision repair
Thimo_2592
03420 Nucleotide excision repair
Thimo_2592
03440 Homologous recombination
Thimo_2592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmb03032
]
Thimo_2592
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_2592
Enzymes [BR:
tmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thimo_2592
DNA replication proteins [BR:
tmb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Thimo_2592
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Thimo_2592
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thimo_2592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AGA91316
UniProt:
L0GZC9
LinkDB
All DBs
Position
complement(2866425..2869109)
Genome browser
AA seq
894 aa
AA seq
DB search
MTKSYPLILVDGSSYLFRAYHALPKLTNSRGEPTGALVGVLNMLRKLRDEHRPERIAVVF
DAPGKTFRDDLYPKYKANRPPLPDDLREQIEPLLTVIRAMGLPLVVVPDVEADDVIGTLA
MRAAEAGLDTLVSTGDKDLAQLVDERITLVNTMSDTFLDREAVKAKFGVAPERIVDLLSL
TGDSVDNIPGVAGCGPKTAAKWLAAYGDLDGVIAHADEIKGKAGEGLRAALEQLPLAREL
TKIRCDLALDFGPDDLHPGEPDVVALRDWYTRLEARRLLETLPDDDAVANEAPQYDLVLD
EADFEAWLTRLAGADLFAFDTETTSLDYMRAELVGVSFAIEPGRAAYVPLAHAYPGAPDQ
LGRDSVLARLKPLLEDPRRAKVGQNLKYDMSVLARYDIHLVGIAHDTMLESYVLDSTATR
HDMDALAKKYLGRETISFEAVAGKGAKQLTFDQVPLETAGDYAAEDAEVTLGLHQALWPR
LEAVPSLAGLYREIEMPLVPVLSRMERTGVRIDRDLLAAQSRALTKRIQALEEQAYAAAG
RPFNLGSPKQIGAIFFDEKKLPVVAKTPSGAPSTSESVLERLAADGYELPSLILEHRRLA
KLRSTYTDKLPQMINPATGRVHTSYHQAVAATGRLSSSDPNLQNIPIRRDEGRQIRRAFV
PEPGHRLLAADYSQIELRIMAHLSGDERLLAAFAAGQDIHRATAAEILGLSPEDVTGEQR
RSAKAINFGLIYGMSAFGLARQLGIERGAAQDYVDRYFARYPGVRAYMDRTRAQAHEDKY
VETLFGRRLYLTDINHSNQGRRAGAERTAINAPLQGTAADVIKRAMIAVDDWIERERPPV
RLIMQVHDELVFEVAEDRVDEAAEPIRQAMEGAAELAVPLLVDIGVGGDWDEAH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcctacccgctcatcctcgtcgatggctcgtcctacctgttccgcgcctac
cacgcattgccgaagctgaccaactcgcgcggcgagccgaccggcgccctggtcggcgtg
ctcaacatgctgcgcaagctgcgcgacgagcatcggcccgagcggatcgcggtcgtcttc
gatgcgcctggcaagaccttccgtgacgacctctacccaaagtacaaggccaaccgcccg
ccgttgccggacgatctgcgcgagcagatcgagccgctgctgacggtgatccgggcgatg
ggactgccgttggtcgtcgtcccggacgtcgaggccgacgatgtcatcggcacgttggcc
atgcgtgcggccgaggcggggctcgataccctggtctcgaccggcgacaaggacctggcc
caactcgtcgacgagcgcatcaccctcgtcaatacgatgagcgatacgttcctcgatcgc
gaggccgtgaaggcgaagttcggcgtcgcgcccgagcggatcgtcgatttgctgagcctg
acgggcgacagcgtcgacaacattcccggggtcgccggctgtggtccgaagacggccgcc
aagtggctcgccgcctatggcgatctcgacggcgtcatcgcccacgccgacgagatcaag
ggcaaggccggcgagggcctgcgtgcggccctggaacagctgccgctcgcacgcgagctg
acgaagatccgctgcgacttggcactggatttcgggccggacgacctgcacccgggcgag
cccgatgtcgtcgccctgcgcgactggtacacgcgtctcgaggcgcggcggctccttgag
acactgcccgacgacgacgcggtggccaacgaggcgccgcagtacgatctggtcctggac
gaggccgacttcgaggcctggctgacgcggctcgcgggtgccgacctcttcgccttcgac
accgagacgacgtcgctcgactacatgcgggccgagctggtcggagtgtccttcgccatc
gagccggggcgggccgcctacgtgccgctcgcccacgcctatcccggtgccccggatcag
ctcgggcgcgactcggtcctggcgaggctgaagccgctgctcgaggacccgcggcgcgcc
aaggtcgggcagaacctcaagtacgacatgagcgtgctggcgcgctacgacatccacctg
gtcggcatcgcccacgacaccatgttggagagctatgtgctcgacagcaccgcgacccgc
cacgacatggacgccctggcgaagaagtacctgggccgtgagacgatcagcttcgaggcg
gtcgccggcaagggggccaagcaactgaccttcgatcaggtgccgctggagacggccggc
gactatgccgccgaggacgccgaggtgacgctcggactgcaccaggccctctggccgcgg
ctcgaggcggtgccgagtctggcaggtctctaccgcgagatcgagatgccgctggtgccc
gtcctgtcacggatggagcggaccggcgtgcgtatcgaccgcgacctgctcgccgcccag
agccgcgcgctaaccaagcgcatccaggcgctcgaggagcaggcctatgccgccgccggg
cggcccttcaatctcggttcgccgaaacagatcggggctatcttcttcgacgaaaagaag
ctgccggtcgtcgccaagaccccgagcggggcgccgtcgacgtccgagtcggtcctcgag
cgactcgccgccgacggctacgagctgcccagcttgatcctcgagcaccgccgcctcgcc
aagctgcgctcgacctacaccgacaagctgccgcagatgatcaatccggcgaccgggcgc
gtccatacctcgtatcatcaggccgtcgcggcgaccggccggctctcctccagcgatccg
aacctgcagaacatcccgatccgccgcgacgaggggcgccagatccgccgcgccttcgtg
cccgagccgggccatcgcctgctcgccgccgactactcgcagatcgagctgcgcatcatg
gcccacctgtcgggcgacgagcgcctgctcgcggccttcgccgccggacaggacatccac
cgtgcgacggccgccgagatcctgggtctctcgcccgaagacgtcacgggcgagcaacgc
cgctcggccaaggcgatcaacttcgggctcatctacggcatgtcggccttcgggctggcc
cgccagctcggcatcgagcggggtgccgcgcaggactatgtcgatcgctatttcgcccgc
taccccggcgtgcgcgcctacatggaccgcacccgcgcccaggcccacgaggacaagtac
gtcgagaccctgttcgggcggcgcctctatctcaccgacatcaaccacagcaatcagggc
cggcgcgccggcgccgagcgcaccgcgatcaacgccccgctgcaagggacggcggccgac
gtgatcaagcgggcgatgatcgccgtcgatgactggatcgagcgcgagcgcccgccggtg
cgcctgatcatgcaggtccacgacgagcttgtcttcgaggtcgccgaggaccgggtcgac
gaggccgccgagccgatccgccaggcgatggagggggctgccgagctggccgtgccgctc
ctggtcgacatcggcgtcggcggcgactgggacgaggcgcattga
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