Thioflavicoccus mobilis: Thimo_2834
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Entry
Thimo_2834 CDS
T02397
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Thimo_2834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmb03021
]
Thimo_2834
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_2834
Enzymes [BR:
tmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Thimo_2834
Transcription machinery [BR:
tmb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Thimo_2834
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Thimo_2834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
AGA91539
UniProt:
L0H1T5
LinkDB
All DBs
Position
complement(3129182..3130195)
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AA seq
337 aa
AA seq
DB search
MAEAVGDFLKPRAIRVEPVDGSVNHARISLEPLERGYGHTLGNALRRVLLSSMSGCAITE
VEIQGVLHEYTTLEGVQEDVLEILLNLKEVAISLSGKDEATYTLSKTGPGVVTAGDIALD
HAAVLYNPDLVIANLTGSVELSMSMTVRRGIGYEPAAQREGFGSEERPIGKLQLDASFSP
VRRVAIEVQAARVEQRTDLDRLVIDLETNGTIEPRAAIQTAAQILRDQLSSFVALEGSEL
ADTQEPIGSKTPEWDPILLRPVDDLELTVRSANCLKAENIYLIGDLIQRTEVELLKTPNL
GKKSLTEIKDVLATRGLSLGMRLENWPPENIDELTIR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctgttggcgactttctcaagccgcgggcgatccgtgtcgagccagtcgat
gggagcgtgaatcacgctcgtatttcgctggagcccctcgagcggggttacggacatacg
ctgggcaatgcgctgcggcgcgtgctgctgtcctcgatgagcggttgcgcgattaccgag
gtcgagatccagggtgtcctccacgagtacacgaccctcgagggggttcaagaggacgta
ctcgagatcttgttgaatctcaaggaggttgccatctccttgagcggcaaggatgaggcg
acctatacgctgagcaagaccgggcccggcgtggtgaccgccggcgacatcgcgctggac
catgcggcggtgctctacaatccggatctggtcattgccaatctgaccggttcggtcgaa
ctgagcatgtccatgacggtgcgtcggggcattggctacgagccggccgcgcagcgcgag
ggcttcggctccgaggagcggccgatcggcaagctgcagctcgatgcctcgttcagtccg
gtacgccgcgtggcgatcgaggtgcaagccgcccgcgtcgagcaacgcacggatctcgat
cggttggtgatcgacctggagaccaacggcacgatcgagccgcgcgcggcgatccaaacg
gcggcgcagatccttcgcgatcagctctccagcttcgtcgcgctcgagggcagcgagctg
gctgacacccaagagccgatcggcagcaagacgccggagtgggatccgatcctgctgcgt
ccggtcgacgatttggaactgacggtgcgctcggcgaactgcctgaaggccgagaacatc
tacctgattggggatctcatccagcgcaccgaggtggagctgctcaagactccgaaccta
ggcaagaagtcgctgaccgagatcaaggatgtgctggcgacgcgcggactctcgttgggc
atgcgcctggagaactggccgcccgagaatattgacgaattgaccattcggtaa
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