Thioflavicoccus mobilis: Thimo_2867
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Entry
Thimo_2867 CDS
T02397
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Thimo_2867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmb03021
]
Thimo_2867
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_2867
Enzymes [BR:
tmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Thimo_2867
Transcription machinery [BR:
tmb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Thimo_2867
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Thimo_2867
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AGA91571
UniProt:
L0H030
LinkDB
All DBs
Position
complement(3151393..3155547)
Genome browser
AA seq
1384 aa
AA seq
DB search
MAYSFTEKKRIRKDFGKRPGILDVPFLLATQIDSYRDFLQAEAPTKKRDDKGLHAAFKTV
FPIESYSGNAVLEYVSYRLGEPAFDVRECHLRGATYAAPLRVLLRLVIYDKEAPAGSKVV
KDIKEQEVYMGEVPLMTETGTFIINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKLLFSA
RVIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATVLLRALGYDVEEILARFFQTDTFFFDG
EETRLVLVPERLRGETVGFDIQLGDQVLVEAGRRVTQRHIRELMKAGIDQLDVPNDFLVG
RVLAHTQVDQETGEVLAEANAELTPELIATLRVKGVKRLETLFVNDLDQGPYISETLRID
ATTNELEAQVEIYRMMRPGEPPTKDAAQNLFHNLFFTADRYDLSAVGRMKFNRRLGRDSE
EGPGILYDGCYFKGRTDEASQALYQAHGDTSDIVDAMKVLVDLRNGRGTVDDIDHLGNRR
IRCVGEMAENQFRVGLVRVERAVKERLSLAESEGLMPQELINAKPVSAAIKEFFGSSQLS
QFMDQNNPLSEVTHKRRVSALGPGGLARERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI
NSLAVYARTNRFGFLETPYRKVEDGRLLDQIDYLSAIEEGHYVIAQANATLDETGRLTDA
LVSCRHMNEFTMKAPEEVNYIDVSPRQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPT
LCAEKPLVGTGMERVVAKDSGVVVWARRGGVVESVDAARIVVRVNDDEAEPGVPGVDIYN
LTKYTRSNQNTCINQRPLVAPGDEIARNDVLADGPSTDMGELALGQNLRVAFMPWNGYNF
EDSILISERVVQEDRFTSIHIEELTCLARDTKLGQEEISGDIPNVGEAALSKLDESGIVY
IGAEVRDGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRLPSGMAGTVVDVQ
VFTRDGVEKDKRALQIDEMELDRVRKDLADQQRIMENDAFHRVERLLLNKVADGGPRGLR
PGAKVTKSYLAELAQQDGKDAWLEIRLHSEDAASQLEAAAVQVKQLRDDFRQRYEAKKRK
IASGDDLAPGVLKMVKVYVAVKRRVQPGDKMAGRHGNKGVISMIVPVEDMPFSADGEPVD
VVLNPLGVPSRMNVGQVLETHLGWAAKGLGRKIERMLRAQAAIGDLRTLLEQIYNASGRT
EDLASFSDAEIIELARNLTGGVPLATPVFDGATEAEIKAMLRLADLPEAGQAVLYDGRTG
DRFEREVTVGYMYMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEAGMPESFNVLVKEIRSLAINVE
LEQD
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggcctattcgttcaccgagaaaaagcgcatccgcaaagatttcggcaaacgtcccggt
atcttggacgtcccctttctccttgccacccaaatcgattcgtaccgtgacttcctgcag
gccgaggcgcccacgaagaagcgtgacgacaagggcctgcatgcggcgttcaagaccgtc
tttccgatcgagagctattccggcaacgcggtgctggagtacgtgagctatcggctcggc
gagcccgccttcgatgtgcgcgagtgccatctgcgcggtgcgacctatgcggcgccactg
cgcgtcctgctgcgcttggtgatctacgacaaggaggcaccggccggctccaaggtcgtc
aaggatatcaaggagcaggaggtctacatgggcgaagtgcccctgatgaccgagaccggc
accttcattatcaatggcaccgagcgggtcatcgtctcccagttgcatcgctcgccgggt
gtgttcttcgaccatgacaagggcaagacgcactcctccgggaagctcctcttctcggcg
cgcgtgatcccctatcgcggctcctggctcgatttcgaattcgacccgaaggacaacctc
ttcgtgcgcatcgaccggcggcgcaagctcccggcgaccgtgctactgcgcgcgctcggc
tatgacgtcgaggagatcctcgcgcgcttctttcagaccgacaccttcttcttcgacggc
gaggagacgcgcctcgtcctggtacccgagcggctgcgcggcgagacggtcggattcgat
atccagctcggcgatcaggtcctcgtcgaggccgggcggcgcgtgacccagcgccacatc
cgcgagctgatgaaggccggcatcgaccagctcgacgtgccgaacgattttctcgtcggc
cgcgtgctggcccacacccaggtcgatcaggagaccggtgaggtcctcgccgaggccaac
gccgagctgaccccggagctgatcgcgacgctgcgcgtcaagggcgtcaagcggctcgag
accctcttcgtcaacgatctggatcaggggccttacatctccgagaccctgcgcatcgat
gcgacgacgaacgagctggaggcgcaggtcgagatctaccgcatgatgcgcccgggcgag
ccgccgaccaaggacgccgcccagaacctgttccataacctgttcttcaccgccgaccgc
tacgatctctccgcggtggggcgcatgaagttcaaccggcggctcgggcgcgactccgag
gaggggccgggcatcctctacgacgggtgctatttcaagggtcgcaccgacgaggcgtcg
caggccctctatcaggcgcacggcgacacctccgatatcgtcgatgcgatgaaggtcctc
gtcgacctgcgtaacggtcgtgggaccgtcgatgacatcgaccacctgggcaaccgccgc
atccgttgcgtcggcgagatggccgagaaccagttccgcgtcggcctggtacgggtcgag
cgcgccgtcaaggagcgtctgtcgctggccgaatccgaaggcctgatgccgcaggagctg
atcaacgccaagccggtctcggcggcgatcaaggagttcttcggctccagtcagctctcg
cagttcatggatcagaacaacccgctctccgaggtgacccacaagcggcgcgtctcggcg
ctcggccccggcggccttgcacgcgagcgggccggtttcgaggtccgagacgtgcacccg
actcactacggtcgggtctgtccgatcgagacgccggaaggtccgaacatcgggctgatc
aattcgctggccgtctacgctcgcaccaaccgattcggctttctcgagaccccctatcgc
aaggtcgaggatgggcgtctcctcgatcagatcgactatctctcggcgatcgaggagggc
cactatgtcatcgcccaggccaacgcgaccctggacgagacgggccgcctgaccgatgcc
ctggtctcgtgccggcacatgaacgagttcacgatgaaggcgccggaggaggtcaactac
atcgacgtctcgccgcgtcagatcgtctcggtggccgcctcgctgatcccgttcctcgaa
cacgacgacgccaaccgcgccctgatgggctcgaacatgcagcgccaggccgtgccgacg
ctgtgtgccgagaagccgctggtcggcaccggcatggagcgggtcgtcgccaaggactcc
ggcgtcgtggtctgggcgcgtcgcggtggcgtcgtcgagtcggtcgacgccgcgcgcatc
gtggtgcgtgtcaacgacgacgaggccgagccgggggtgccgggtgtcgacatctacaac
ctgaccaagtacacccgttcgaaccagaacacctgcatcaaccagcgtccgctggtggcc
ccgggtgatgagatcgcgcgcaacgacgtgctggccgacggcccgtcgaccgacatgggc
gagctggccctcgggcagaatctgcgcgtcgccttcatgccgtggaatggctacaacttc
gaggactcgatcctgatctccgagcgcgtcgtgcaggaggatcgcttcaccagcatccac
atcgaggagctcacctgtctagcgcgcgacaccaagctcggccaggaggagatctccggc
gacatcccgaacgtcggcgaggcggcgttgtcgaagctcgacgagtcgggcatcgtctac
atcggcgccgaggtgcgcgacggcgatatcctagtcggcaaggtcacgccgaagggcgag
acccagctcaccccggaggagaagctgctgcgggcgatcttcggcgagaaggcctcggac
gtgaaggacacctcgctgcgcctgccctcggggatggccgggaccgtcgtcgacgtccag
gtcttcacccgcgatggcgtcgagaaggacaagcgtgccctgcagatcgacgagatggag
ctcgatcgggtgcgcaaggacctcgccgaccagcaacgcatcatggagaacgacgccttc
catcgcgtcgaacggctgttgctcaacaaggtcgccgacggcgggccacgcggcctgcgc
cccggggccaaggtcaccaagagctacctggccgaactcgcccagcaggacggtaaggac
gcctggctggagatccgcctgcatagcgaggacgcggccagccagctcgaggcggcggcg
gtacaggtcaagcagctgcgcgatgacttccgtcagcggtacgaggcgaagaagcgcaag
atcgccagtggcgacgacctcgcccctggcgtgctcaagatggtcaaggtctatgtcgcc
gtgaagcggcgcgttcagccaggcgacaagatggccggccgccatggcaacaagggtgtc
atctcgatgatcgtgccggtcgaggacatgcccttctcggccgacggcgagcctgtcgac
gtggtcctcaatccgctcggcgtgccctcgcgcatgaacgtcggccaggtcttggagacg
cacttgggctgggcggccaaggggctcgggcgcaagatcgaacggatgctgcgggcccag
gccgcgatcggtgacctacgcaccctgctcgagcagatctataacgcgagtggccgcacg
gaggatttggcgagcttcagcgacgccgagatcatcgaactggcgcgcaacctcaccggc
ggcgtgccgctggcgaccccggtcttcgacggcgcgaccgaggcggagatcaaggccatg
ttgcgcctcgccgatctgccggaggcgggtcaggcggtcctctatgacgggcgcaccggc
gatcgcttcgagcgcgaggtgaccgtcggctacatgtacatgctcaagctcaatcacctg
gtcgatgacaagatgcacgcccgctccactggcccctacagtctggtgacccagcagccg
ctcggcggcaaggcccagttcggcggccagcgcttcggcgagatggaggtctgggcgctc
gaggcctatggcgccgcctatacgctgcaggagatgctcaccgtcaagtccgatgatgtg
aacggccgcaccaagatgtacaagaacatcgtcgatggcgatcaccgcatggaggctggc
atgcccgagtccttcaatgtgctggtcaaggagatccgctcgttggccatcaatgtcgag
ctcgagcaggactaa
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integrated database retrieval system
