Thioflavicoccus mobilis: Thimo_3008
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Entry
Thimo_3008 CDS
T02397
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb00900
Terpenoid backbone biosynthesis
tmb01100
Metabolic pathways
tmb01110
Biosynthesis of secondary metabolites
Module
tmb_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Thimo_3008
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tmb01006
]
Thimo_3008
Enzymes [BR:
tmb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Thimo_3008
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Thimo_3008
2.5.1.29 geranylgeranyl diphosphate synthase
Thimo_3008
Prenyltransferases [BR:
tmb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Thimo_3008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AGA91699
UniProt:
L0H283
LinkDB
All DBs
Position
complement(3288351..3289220)
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AA seq
289 aa
AA seq
DB search
MDATKRIEQALTAAVADAEGPLCPPRLAAAIRYAVFPGGARIRPQLALAVAWACGDDAPD
VADAAAVAIELLHCASLVHDDLPCFDNAPIRRGKPSVHKAFGERLAVLAGDALIVLAFET
LARRVASRPERLAPLLLIVGGSVGMTSGIIAGQAWECEPRIELAEYHRAKTAALFAAATA
AGAAAAGADPEAWRAFGERLGEAYQVADDIRDVAATAEDLGKPIGQDQAHDRPSAARELG
VAGAMERLEALVAGAVAAIPSCPGAEDLRKLIRAEVLRLLPKELSRRVA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacgctacgaagcggatcgagcaggccctcacggccgctgtcgccgatgccgagggg
ccgctctgtccgccgcgtctggcggcggccatccggtatgccgtattccccggtggggcg
cgaatcagaccccagttggcgctcgccgtagcctgggcctgtggtgacgatgcgccggat
gtcgccgatgcggcggccgtggcgatcgagttgctccattgtgcctcgttggtccatgac
gacctgccgtgtttcgataatgccccgattcgccgcggcaagccgtcggtccacaaggcc
ttcggcgagcgtctcgcggtgctcgccggcgacgccctcatcgtgttggccttcgagacg
ctggcgcggcgggtggcaagtcgtccggaacggctcgcacccctcctgctgatcgtcggc
ggttcggtcggtatgacttcgggcatcatcgccggtcaggcctgggagtgcgagccgcgt
atcgagctcgccgagtatcaccgcgccaagaccgcggcgctcttcgctgccgcgaccgcc
gcgggggcggcggccgctggggccgatcccgaggcctggcgagcctttggcgagcgactc
ggcgaggcctaccaggtggccgacgatatccgggacgtggcggccacggccgaggacctc
ggtaagccgatcggtcaggatcaggcccacgatcgaccgagcgcggcacgcgaactgggc
gtcgccggtgcgatggaacggctcgaggcgctcgtggccggcgccgtagcggctatccct
tcctgtcccggcgctgaggatctgcgcaagctgatccgcgccgaagtattgcggctcctg
ccaaaggagctttcacgacgcgtcgcctga
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