Thioflavicoccus mobilis: Thimo_3362
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Entry
Thimo_3362 CDS
T02397
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Thimo_3362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_3362
Enzymes [BR:
tmb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Thimo_3362
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Thimo_3362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGA92032
UniProt:
L0H1X0
LinkDB
All DBs
Position
complement(3680954..3681742)
Genome browser
AA seq
262 aa
AA seq
DB search
MDAERRFRYLAAMGVPLWQRRDLPPRPPAERPSAPPERPRSQPVAGAGPETPPPAPPATP
PGGGRTGEIVTLDWDGLRRAVAGCRACTLCETRTQTVFGVGSPHADLMLIGEAPGADEDR
AGEPFVGRAGQLLNRMLQAIGLEREQVFIANILKCRPPGNRDPRSEEAAYCEPFLLRQIA
LLSPKVILALGRVSAQGLLRTDASIGRLRGRWHRFADAGVPLYVTYHPAYLLRTPAQKAA
AWQDLQAVRRRLSQPIAPAGRE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttggacgccgagcgccgcttccgttatctggcggcgatgggggtgccgctctggcagcgc
cgcgacctaccgccaaggccgccggccgagcgccccagcgcaccgccggagcgaccaagg
tcgcagccggtcgccggagcgggccccgagacgccgccgccggcgccaccggccacgccg
cccggcggcgggcgcaccggcgagatcgtgacactcgactgggacgggctgcgccgcgcc
gtcgccggctgccgcgcctgcaccctctgcgagacccgcacccaaaccgtcttcggggtc
ggcagcccgcacgccgacctgatgctgatcggcgaggcccccggggccgacgaggaccgg
gccggcgagcccttcgtcgggcgggccggtcaactactcaatcggatgctccaggcgatc
ggcctggagcgcgaacaggtcttcatcgccaacattctgaagtgccgcccgcccggcaat
cgcgacccgcggtccgaggaggcggcctactgcgagccctttctgctgcgtcagatcgcc
ctgctctcgccgaaggtgatcctcgcgctcgggcgcgtctcagcccagggcctgctgcgc
accgacgcctcgatcggccggctgcgcggacgttggcaccgcttcgccgatgcgggcgtg
ccgctctacgtcacctaccacccggcctacctgctgcgcacaccggcccagaaggccgcc
gcctggcaggacctgcaggcggtgcgccgtcgcttgtcacagccgatcgcacctgccggt
cgagaatga
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