Thioflavicoccus mobilis: Thimo_3662
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Entry
Thimo_3662 CDS
T02397
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tmb
Thioflavicoccus mobilis
Pathway
tmb03030
DNA replication
tmb03430
Mismatch repair
tmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thimo_3662
03430 Mismatch repair
Thimo_3662
03440 Homologous recombination
Thimo_3662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmb03032
]
Thimo_3662
03400 DNA repair and recombination proteins [BR:
tmb03400
]
Thimo_3662
Enzymes [BR:
tmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thimo_3662
DNA replication proteins [BR:
tmb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thimo_3662
DNA repair and recombination proteins [BR:
tmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thimo_3662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AGA92318
UniProt:
L0GZX4
LinkDB
All DBs
Position
complement(4002525..4003247)
Genome browser
AA seq
240 aa
AA seq
DB search
MVLGARQRQASPSWADYFALQAQACGTPALKDFYAAGVPAEERPIGEVPLVALDFETTGM
DPREHAIVSIGLVPFDLRVIRPSAGRYWVVKPPRSLREESIAFHRITHSEVEHAPPIAAI
LDEVLSELKGRLVVVHYRNIERPFFDAAVMANRGEHCLFPLVDTMALEARWENHGRLRGI
KRLLGIERSSIRLADSRDRYGLPHYSSHHAKLDAIATAELFQAQVARHSRPSTPVSDLWI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgggcgcgcgccagcggcaggcatccccgagctgggcggactatttcgccctc
caggcccaggcctgcgggacgccggccctcaaagacttctacgcggcaggggtgccggca
gaggagcgccccatcggggaggtcccgctggtggcattggatttcgaaaccacgggcatg
gatccccgcgagcacgccatcgtcagcatcggcctggtgcccttcgacctgcgggtcatc
cgcccgtcggcgggccgttactgggtcgtcaagcctcccagatccctccgggaggagtcc
atcgccttccatcgcatcacccactcggaggtggagcacgcgccacccatcgccgccatc
ctcgacgaggtattgtccgagctcaaaggccgtctggtggtcgtccactaccgcaatatc
gagcggccgttcttcgatgccgccgttatggccaatcgcggtgagcactgcctgtttccc
ctcgtcgacaccatggccctcgaggcgcgctgggagaaccatggccgtctgcggggtatc
aagcgcctgctcggcatcgagcggtcctccatccggctggccgacagccgcgaccgctac
ggcctgcctcattattcctcgcatcacgccaagctggatgccatcgccacggcggagctc
ttccaggcacaggtggcccggcattctcggccgagcacaccggtatccgatctctggatc
tag
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