Legionella micdadei: LMI_0253
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Entry
LMI_0253 CDS
T03810
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tmc
Legionella micdadei
Brite
KEGG Orthology (KO) [BR:
tmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmc03016
]
LMI_0253 (truB)
Enzymes [BR:
tmc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LMI_0253 (truB)
Transfer RNA biogenesis [BR:
tmc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMI_0253 (truB)
Prokaryotic type
LMI_0253 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
TruB_C
VP16-like
Motif
Other DBs
NCBI-ProteinID:
CEG59615
UniProt:
A0A098GCB9
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All DBs
Position
I:252438..253337
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AA seq
299 aa
AA seq
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MTKVECNRVINGILLVNKPQGLSSNAVLQQVRRLYRAKKAGHTGSLDPLATGMLPICFGE
ATKFCQYLLDADKCYEATGVLGVKTNTGDVLGEVIKTTPPFTLNESDLLIALKQFKGTIK
QVPSMFSALKHKGTPLYKYAREGITIERPAREITVHELELIAFSGNQFEIKVSCSKGTYI
RNLVEDIGDLLGVGAHVTKLHRLSTAGFGNAKMYTLDELQQKSPEELVDCLLPMERAVSY
LPRLDLGNDEISALRQGKALDWIGKNEASGCVRLYNNNCFIGLGELNAGNLSVKRLLAF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagttgagtgtaatagagtaatcaatggtattttattggtaaataaaccccag
ggattgtcctccaacgcggttttacaacaagtcaggcgcttgtatagggcaaaaaaggca
gggcatactggaagtttggatcccctagcgacaggcatgttgccgatttgttttggcgag
gcaacgaaattttgccaataccttttggatgcagataaatgctatgaagctactggggtt
ctcggagttaaaaccaataccggggacgtgttaggtgaagttattaaaacaacaccgccc
tttacattaaatgagtcagatttactgattgctttgaaacaatttaaaggcacaattaaa
caagttccttccatgttttctgctctaaaacataaaggaacccccctttacaaatatgca
agagaggggatcaccattgagcgtccagcgagggaaattaccgtccatgaattggagtta
attgcttttagcgggaatcaatttgaaatcaaggtttcttgctcaaagggaacttatatt
cgtaatttagtcgaagatattggcgacttattgggtgtcggagcccatgtgactaagctt
caccgtttgagcacagcaggttttggcaatgcaaaaatgtatactttagacgaactacaa
caaaaatcaccagaggaattagttgattgtttgttaccaatggagcgagcggtgagttat
ttacctcgattagatttaggtaatgatgaaatatccgcattgcgccaaggaaaagcttta
gattggatagggaaaaatgaagcaagtggctgtgttcgtctttataataacaactgtttc
attggcttaggtgaattaaacgcaggcaatttaagcgttaaacgcctgctagcattctga
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