Legionella micdadei: LMI_0430
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Entry
LMI_0430 CDS
T03810
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tmc
Legionella micdadei
Pathway
tmc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMI_0430 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmc03021
]
LMI_0430 (rpoC)
03400 DNA repair and recombination proteins [BR:
tmc03400
]
LMI_0430 (rpoC)
Enzymes [BR:
tmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMI_0430 (rpoC)
Transcription machinery [BR:
tmc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMI_0430 (rpoC)
DNA repair and recombination proteins [BR:
tmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMI_0430 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CEG59777
UniProt:
A0A098GCR8
LinkDB
All DBs
Position
I:436723..440973
Genome browser
AA seq
1416 aa
AA seq
DB search
MANLSNDPMRKAPIMSDLLGILKQQGQSEEFDAIKIALASPDLIRSWSYGEVKKPETINY
RTFKPERDGLFCAKTFGPIKDYECLCGKYKRLKHRGVICEKCGVELALAKVRRERMGHIE
LASPVAHIWFLKSLPSRIGLLLDMTLRDIERILYFEAFVVVDPGMTELERGQLLNDEAYL
DAMEQYGDEFDARMGAEAIRDLLRQIELEEEIKSLREELPTTNSETKIKKITKRLKLLEA
FYESGNKPEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLN
APDIIVRNEKRMLQESVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKR
VDYSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFSKLEFRGLATTIKAAKKMVEREDP
VVWDILDDVIREHPILLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAYNADFDGDQM
AVHVPLTLEAQLEARSLMMSTNNILSPASGEPIIVPSQDVVLGLYYLTRERINALGEGKI
FASPQEAQNFYEAGYVDIHAKVKIRMPKEGSEIGQGYELVETTVGRAILSDILPEGMPFA
LINRAMTKKAISKVLDTCYRKFGLKETVIFADQLMYTGFKYATRAGASIGIEDMEIPDDK
AAIIEQADNEVREIEAQYRSGLVTNGERYNKVIDIWSRTNEMVAKSMMSKIATEEVTDRS
GNVSRQESFNPIFMMADSGARGSAAQIRQLAGMRGLMAAPDGSIIETPITANFREGLNVF
QYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDVVITEDDCGTENGILMQPLIEGGD
IVEPLHERVLGRVVAKDVYIPNQDDPIVNAGTLLDEDWVEKLEKFGVDQVLVRSPITCET
RFGLCAKCYGRDLARGHLVNTGEAVGIIAAQSIGEPGTQLTMRTFHIGGAASRATAANNI
QIKNKGVIRLHNIKTVTHENNNLVAVSRSGEVSIVDDFGRERERYKLPYGAVLTVHDNQP
VEAGQIIATWDPHTHPVISEVSGKLKFVDLIEGLTMNRQTDELTGLSNIVVTDAKQRSSA
GRDMRPMVKLVSDDGEDIYLAGTNVPAQYYLPVDAIINFEDGSAVGVGDVIARIPQERSK
TRDITGGLPRVADLFEARKPKDAAVMAEVSGLINFGKETKGKRRLIITASENQAHEELIP
KWRHISVFEGEHVERGEVIADGPLNPHDILRLLGVGALANYIVNEVQDVYRLQGVKINDK
HIEVIVRQMLRKRVITFAGDSKFLAGEQIEESMMLQENDKLIAEGKQPAQGTPILLGITK
ASLATESFISAASFQETTRVLTEAAVSGKVDELRGLKENVMVGRLIPAGTGYAYHQGRKS
KRAKATGTEPSAHTVTASDVEHALSEALNAEDNHDH
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
ttggctaatctaagcaacgacccaatgagaaaagcgcctataatgagtgatttgctgggt
atcctcaagcagcaaggccagagtgaagaatttgatgcgattaagatcgcacttgcttca
cctgatttaattcgatcatggtcctatggcgaagttaaaaagccagaaaccattaactac
cgtacatttaaacccgagcgtgatggtttattttgtgctaaaacttttggtccaattaag
gattatgagtgcctatgtggcaaatataagcggctcaaacaccgcggtgttatttgtgag
aaatgcggtgtagagttagcattggcaaaagtacgacgtgaacgtatggggcacattgag
cttgctagccctgttgctcacatatggttcttgaaatcgcttccttcccgtataggtcta
ttgctcgatatgacattacgcgatatagaacgcatactctactttgaggcttttgtagta
gtagatccgggtatgactgagttggagcgtgggcaactgctcaacgacgaggcttacctt
gatgccatggagcagtacggtgatgagtttgatgcccgtatgggagctgaggcaatccgt
gatcttttgcgtcaaattgaacttgaggaagaaatcaaatcattgcgcgaagagttacct
acaactaattctgaaaccaaaattaaaaaaatcactaagcgactaaagttgttagaagca
ttttacgaatctggaaacaaacctgaatggatgatcatggatgtgttgcctgttcttcct
cctgatttacgcccattagttcctcttgacggtggacgctttgctacttctgacttaaat
gatctttaccgtcgtgtgatcaaccgcaataatcgattaaagagactgcttgatctaaat
gcacccgatatcattgtgcgaaacgaaaagcgtatgctgcaagaatccgttgacgcactg
ctcgataatggtcgccgaggtcgggcaataaccggaacgaataagcgtcccctcaaatca
ttggctgacatgattaaagggaagcaaggtaggttcaggcaaaatctgctaggtaaacgt
gtagattattcagggcgctcagttatcgttgtgggacccaccttgcggttacatcaatgc
ggtttgcccaagaaaatggcgcttgaactatttaaaccctttatatttagtaaattggag
tttagagggcttgccacaacaattaaagcagctaaaaaaatggttgaacgggaagatcca
gtagtttgggatattctcgatgatgttattcgcgagcaccctattcttctcaaccgcgcc
cctactcttcacagactaggtatacaagccttcgagccagtacttattgaaggcaaggcg
atccagctgcatcctttggtctgtacagcctacaatgctgacttcgatggagaccaaatg
gcggtgcacgtgccattaacgctagaggctcagttggaagcacgttcgctcatgatgtca
acaaacaacatactatctcctgcgagcggtgaaccaataattgtacctagccaagacgta
gtgctcggtctctattatctaactcgtgagcggattaatgcacttggcgaaggaaaaata
tttgccagcccacaagaggcacaaaatttttatgaagcaggctatgtggatatccatgca
aaagtaaaaattcggatgccaaaagagggtagcgaaattggacagggatatgaattagtt
gaaacgactgttggacgcgcaatactttcggatattttgcccgaaggaatgccatttgcg
ctaattaatagagcaatgaccaaaaaagcgatttcaaaagttcttgatacctgttatcga
aagttcggtttaaaagaaaccgttatttttgccgaccaactcatgtatacagggtttaaa
tatgctactcgggctggtgcatctattggtattgaagatatggaaatacctgatgacaag
gcagcgattattgagcaagctgataatgaagtacgagaaattgaagcacaataccgatca
ggtctcgtaacgaatggcgaacgctacaataaagttatcgatatttggtcgcgcactaat
gaaatggttgcaaaatcgatgatgagcaagattgcgactgaggaagttaccgatcgcagc
ggtaatgtatctcgtcaagaatcatttaacccaattttcatgatggcggactctggggcg
cggggttctgcagctcaaatcaggcagctggcaggaatgcggggattgatggcagctcct
gatggctccattattgaaacgccaattacagcaaatttccgagaagggcttaatgtattc
caatactttatttcgacacacggtgcacgtaaaggtcttgcggatactgccttaaaaact
gcaaactcaggatacttaactcgccgtttggtcgacgttgcgcaggatgttgttattaca
gaggatgattgtggtactgaaaacggtatattgatgcaacctctaattgaaggtggggat
attgtagaacctctgcatgagcgtgttcttggacgcgtagttgcaaaagacgtatacatt
ccaaatcaagacgatccgatcgttaatgcaggcacattgctcgatgaagattgggtagaa
aaattggaaaaatttggtgtcgaccaggtactggttcgatcaccgatcacttgtgaaaca
cgttttggtctttgtgcaaaatgctatggacgagatctcgcccggggtcatttagtaaac
actggggaagcagttggtatcattgctgcgcagtcaatcggtgagccaggtactcagcta
acgatgcgtaccttccatattggtggtgctgcatcaagagcaacagcggcaaataacatc
caaattaaaaacaagggtgttatccgattacataacatcaaaactgtaacgcatgaaaac
aacaatctagttgccgtctcacgttcaggtgaagtatccattgttgacgattttggccgt
gaacgagagcggtataagttgccctacggtgctgtgctcactgtccatgataatcaacct
gtggaagctgggcagattattgctacttgggatcctcatacccacccagtaatttcagag
gtgagcggtaaattgaagtttgtcgacctcattgaaggtttaacaatgaaccgacaaact
gatgaactcacaggccttagcaacattgttgttactgacgccaaacagcgtagctctgca
ggcagagatatgcgcccgatggtaaaactggtgtctgatgatggtgaggacatctaccta
gccgggacgaacgttccagcgcaatactatttgccggtggacgcgatcattaattttgaa
gacggaagtgctgtaggggtaggagatgttattgcgcgtatacctcaagagcgttctaag
acacgtgatattactgggggtctgcctagagtggctgacctattcgaagcaagaaagcct
aaagatgctgctgtaatggcagaagtttcaggcttaatcaacttcggtaaggaaacaaaa
ggtaaaagacgcctgataattactgcttctgagaatcaggcccatgaggagttaattcca
aaatggcgccatatttcagtcttcgaaggtgaacatgtggaacgcggtgaggttattgca
gatggcccattgaatccgcatgatattttgcggttgctcggagtcggtgcattagcaaat
tacatcgttaatgaagtacaagacgtatatcgcttacaaggtgtgaaaatcaatgataaa
cacatcgaagttattgtccgtcaaatgctacgtaaacgcgtgattacatttgctggtgat
tcgaagttcctcgccggggaacaaatcgaagaaagcatgatgttgcaagaaaatgataaa
ttaattgccgaaggtaagcagcctgcacaaggcacgcctattcttctaggtattactaaa
gcttctctagcaacggaatcattcatttctgcggcatcattccaagaaacaactcgcgtg
ctgactgaagcagcagttagcggtaaagttgatgagttgagaggtctaaaggaaaacgtg
atggtaggtcgcttaatcccagcaggaacaggatacgcttatcatcagggcagaaagtca
aaacgtgcaaaagccacagggacagagccaagtgcgcatacggttacagccagtgatgtg
gagcatgcattaagtgaagctcttaatgcagaagacaaccatgatcattga
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integrated database retrieval system
