Legionella micdadei: LMI_0697
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Entry
LMI_0697 CDS
T03810
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tmc
Legionella micdadei
Pathway
tmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMI_0697 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmc03019
]
LMI_0697 (rhlE)
Enzymes [BR:
tmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMI_0697 (rhlE)
Messenger RNA biogenesis [BR:
tmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMI_0697 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
ERCC3_RAD25_C
Cas3-like_C_2
AAA_11
HI1480
Flavi_DEAD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CEG60021
UniProt:
A0A098GEV3
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All DBs
Position
I:complement(710811..712058)
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AA seq
415 aa
AA seq
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MSFASLGLIEPLLRAVSELGYLDPSPIQIQAIPAVLRGKDVLASAQTGTGKTASFVLPIL
QKLKDKPRARNNRTRVLIITPTRELAAQIHESIIQYGCHLSLRSAVVFGGVKINPQMMKL
RGGVELLVATPGRLLDLHQQRAILFDEVDILVLDEADRMLDMGFIHDIKRVIKLLPANRQ
NLMFSATFSEEIRALVKGILKEPIVIDVAPRNTTAATIKQTVHPVDKSRKSALLSHLIHK
NKLGQTLVFSRTKHGANKLVKQLAQDHIHAAAIHGNKSQSQRTKALAEFKSGELHILVAT
DIAARGIDIDQLPCVINFDLPQVAEDYVHRIGRTGRAGASGQAISLVSADEAAQLNAIER
LIKRRLDRIEIEDFEPNHNLPNSPSPAQTKKNSPKRNKATAIAERAQKQRFGKCK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgcatcattgggtttaatagaacccttgctccgtgccgttagcgaattaggc
tatcttgatccatcccccattcagattcaagctatccctgctgttttacgcggtaaggat
gtcttagcttcagcccaaactggtacaggtaaaacagccagttttgtcttacccattcta
caaaaattaaaagataaaccacgtgctagaaataaccggacccgcgttttgataatcacc
ccaacacgcgaattagctgctcaaattcatgaaagcatcattcaatacggatgccatttg
tcactgcgctctgctgtcgtttttgggggagtaaaaattaacccacaaatgatgaaattg
cgtggaggcgtagagctattagtggcaacgcctggacgattactggatttacaccagcag
cgagccatcctatttgatgaagtggatatcttagttttagatgaagcagatcgtatgcta
gatatgggttttattcatgacataaagcgtgttatcaagttattacctgctaatcggcaa
aatctcatgttttctgccactttttctgaagaaatccgcgccctggttaaaggcatatta
aaggaacccatagtaattgacgtagcgcctcgcaataccactgccgctaccataaaacaa
acggttcatccagtggataaaagccggaaatctgctttattaagccatttaatccataaa
aataaattggggcaaacactggtgttctctcgaaccaaacatggggcaaacaaattagta
aagcaattagcccaagaccacattcacgccgcagccatccatggtaataaatcacaatca
caacgcactaaagctctggctgaatttaaatctggcgagttacacattttagttgctacg
gatattgcagctcgtggcattgatattgatcaactaccttgtgttatcaatttcgatctt
ccgcaagttgcagaagactatgtgcatcgcattggccgaacaggtcgagctggcgcttcg
ggacaggcaatttctttagtgagcgcagatgaggcggcacaattaaatgctatagaacga
ttgattaaacgtagattagatagaattgaaattgaagattttgaacccaaccataacctc
cctaatagcccatcacctgctcaaactaaaaaaaatagtcctaaaagaaataaagcaacc
gccattgcagaaagagctcagaaacagcggtttggcaagtgtaaatag
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