Legionella micdadei: LMI_0824
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Entry
LMI_0824 CDS
T03810
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
tmc
Legionella micdadei
Pathway
tmc02020
Two-component system
tmc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMI_0824 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LMI_0824 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmc03021
]
LMI_0824 (rpoN)
Transcription machinery [BR:
tmc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMI_0824 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_6
Motif
Other DBs
NCBI-ProteinID:
CEG60145
UniProt:
A0A098GDT7
LinkDB
All DBs
Position
I:complement(829218..830606)
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AA seq
462 aa
AA seq
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MKPSLQLSISQQLTLTPQLQQAIRLLQLSTIDLQQEIQQVVESNPMLEIVPNEEKEEIRT
ENKQSPDEFTDFQWSQLYNTSKKASFEDMDINYENLYSTTTNLQDHLRWQLDLTPMSDVD
RVIATSIIDAIDDDGFLTLSLAELHASLDSETHPLDLEEIEVVRHRLQHFDPVGCASYNL
AETLLVQLGQLPDNEDIDLAKRIIRDNIELLGQHNYRQLMKNHQVDEAHLDKALQIIQRL
NPKPGNLIQQDVTEYIIPDITVKKIDGVWQASLNPNTLPRLSINNHYASLIQRADNSADN
QFLKNNLQEARWFLKSIQSRQETLLKVARCIVEYQQDFLEHGEEAMKPLILNDVAQALDM
HESTISRVTTQKFMHTPRGVFELKYFFSSHVGTISGGECSSTAIRAVIKKLIAAENRKKP
LSDSKIAQLIGEQGIQVARRTVAKYREAMGIAPSNERKTIRS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtcgttgcaacttagcattagccaacaactaactctaactccacaactacaa
caagccatccgtctgctccaattatcaaccatagatttgcaacaggagattcaacaagtt
gttgaatcgaatcccatgcttgaaatagtccctaatgaagaaaaagaagagattcgcacc
gagaataaacaaagccctgatgaatttactgatttccaatggtcccagctctataacacc
agtaaaaaagccagttttgaggatatggatattaactacgaaaatttgtactccacaacc
accaatttacaagatcatttacgttggcaactcgatctaactcccatgagcgatgtggat
cgtgtcatcgctacttcaatcattgatgccattgatgacgacggctttcttactttatct
ttagccgaattacacgccagcttagacagtgagacgcatcctttagacttagaagaaatt
gaggtggttcgccatcgtttacaacattttgatcctgtcggttgtgcctcttataatcta
gctgagactttattagtacaattagggcaattgcccgataatgaggatattgatttagcc
aaacggataatccgtgataatatcgagttgctcggccagcataactatcgccaactgatg
aaaaatcatcaagttgatgaagcacacttggataaagcattgcaaattattcagcgctta
aatcctaaaccaggaaatttaatacagcaggatgttactgaatacatcatccccgacatc
acggtgaaaaaaatcgatggtgtttggcaggcttctttaaatcccaacaccttacctcgt
ttaagcattaataaccattatgcttcacttattcaacgggctgataacagtgcagataat
cagtttctaaaaaacaacttacaagaggcccgctggtttttaaaaagtattcagagccgc
caggaaaccttactcaaggtggctcgatgcattgttgaatatcaacaagattttttagag
catggtgaggaagccatgaagccccttattttaaatgacgttgcccaagccttagatatg
catgaatcaacaatttcccgcgtgacaacacagaaatttatgcatacccctcgcggcgtc
tttgagttaaaatattttttctcaagccatgtaggaaccataagcggcggagaatgttca
tcaacggctattcgcgctgtcattaaaaaattgattgccgcagaaaataggaaaaagcct
ctgagtgacagtaaaattgctcagcttattggtgaacaaggtattcaagttgcacgtcga
actgttgctaaataccgcgaagcaatgggcattgccccttccaacgagcgcaaaacaatt
cgtagttag
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