Legionella micdadei: LMI_1579
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Entry
LMI_1579 CDS
T03810
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tmc
Legionella micdadei
Pathway
tmc03410
Base excision repair
tmc03430
Mismatch repair
tmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMI_1579 (recJ)
03430 Mismatch repair
LMI_1579 (recJ)
03440 Homologous recombination
LMI_1579 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmc03400
]
LMI_1579 (recJ)
DNA repair and recombination proteins [BR:
tmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LMI_1579 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMI_1579 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LMI_1579 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
MDN1_4th
Motif
Other DBs
NCBI-ProteinID:
CEG60879
UniProt:
A0A098GEI0
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All DBs
Position
I:1679848..1681578
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AA seq
576 aa
AA seq
DB search
MRIKQRELPRSLPSFSSYPPVLQRIYALRGLNDESQLDKSFQALLPFNTLTDIDKACVRL
EQAIRDQQRILIVGDFDADGATSTALAISALRAMGASHVEFLVPNRFEFGYGLTPAIIEV
AKKWKPNLIITVDNGIASLDGVAAAFKAGIDVIITDHHLPAEHLPKACAIVNPNQPGDLF
KSKSIAGVGVIFYVMLALRRHLINVGWFHSQGLTEPNMAQLLDLVALGTVADVVALDQNN
RILVNQGLARIRQGQCRPGIKALIEISGRNCARLRESDLGFAIAPRLNAAGRLDDMSLGI
ECLLSDNDEKAIMLAKSLDELNQERRIIEAEMKEQAVLAIDKLTKRIENAHQLPVALCMM
DSSWHQGVIGILAGRLKERYHRPVIAFAKVSGDELKGSARSVPVLNIRDALAAVDRDNPG
LIAKFGGHAMAAGLSIHPQAFNNFQQAFIAEVAKHVDISQCEGELWTDGPLQLTEITIET
ANLLHQAGPWGQQFPEPCFDNIFEILDQRLVGQHHLKLSLVHPDGGNPIDAIAFNVDLNQ
WPNYRARQAHIAYRLDVNFYQGKSRLQLLVEAMQVI
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattaaacaacgggaacttccacggtcattgccctcgttttcaagttatcctcct
gttttgcaacgaatttatgccttacgcggtttaaatgatgaatcacagctagacaaaagt
ttccaagccttattaccatttaacaccctcactgacattgataaagcctgcgttcgtttg
gaacaagcgataagagatcaacaacgcatccttatcgtcggcgattttgatgctgatgga
gcaacgtcgacagcgttggcgatttcagctctgcgcgcaatgggagcatcacatgttgag
tttcttgtgcccaatcggtttgagtttggttatggattaactccagctatcattgaagtt
gctaaaaaatggaaacctaatctgatcatcacagttgacaatggtattgccagcttagat
ggggttgctgctgcgtttaaagctgggatcgatgtcattattactgatcaccatttgcca
gctgaacacttgcctaaagcctgcgctattgttaatccaaaccagccgggtgatttattt
aagagtaaatcgattgctggagtgggtgttattttctatgtgatgcttgcattaagacgc
cacttaattaatgtgggctggtttcattctcaaggtttgacagaacctaatatggcgcag
ttacttgatttagtggcgctcggtacagttgctgatgtggtagcactggaccaaaataac
cgtattttagtgaatcaaggacttgcacgcattcgacaggggcaatgtcgcccgggtatt
aaagcattaatcgaaatttcgggaagaaattgtgcccgccttcgtgaaagtgatttaggc
tttgccattgcacctagattaaatgccgcagggcgattggatgatatgtcgcttggtata
gaatgtttactcagtgataatgatgaaaaagcgatcatgcttgctaaaagcctcgatgaa
ttaaatcaagaacggcgcattatcgaagcagaaatgaaagaacaagctgtgttagcaatc
gataaactgactaaaagaatcgaaaatgcgcatcaattaccggttgctttatgcatgatg
gattcgagctggcatcaaggcgtcattggtattctcgccggacgtttaaaagaacgctac
caccgcccagtcattgcctttgcaaaagtaagtggcgatgagttaaaaggttccgcacgt
tcagtacctgttttgaatatacgggatgcgctcgcagcagttgatcgggataacccaggg
ttaatcgctaaatttggcggccatgcaatggcagcggggttaagtatccatccgcaagca
ttcaataattttcaacaggcttttattgctgaagttgctaaacacgtggatatttcacaa
tgtgaaggggaactatggactgatggaccattacagcttacagaaatcacgatagaaaca
gcaaatttgctacaccaagcgggtccttggggacagcaatttcctgaaccttgttttgat
aacatctttgaaattctcgatcaacggttagttggccagcatcatctcaaattaagtttg
gttcatcccgatggcgggaacccaatcgatgcaattgcttttaatgtggatctcaatcaa
tggccaaattatcgcgccagacaggcacatattgcctatagattggatgttaacttttat
caaggtaaatcacgtttgcagttgttggtggaggctatgcaggtaatttag
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