Thalassovita mediterranea: KUV46_01485
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Entry
KUV46_01485 CDS
T07443
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tmd
Thalassovita mediterranea
Pathway
tmd03030
DNA replication
tmd03410
Base excision repair
tmd03420
Nucleotide excision repair
tmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KUV46_01485 (polA)
03410 Base excision repair
KUV46_01485 (polA)
03420 Nucleotide excision repair
KUV46_01485 (polA)
03440 Homologous recombination
KUV46_01485 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmd03032
]
KUV46_01485 (polA)
03400 DNA repair and recombination proteins [BR:
tmd03400
]
KUV46_01485 (polA)
Enzymes [BR:
tmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KUV46_01485 (polA)
DNA replication proteins [BR:
tmd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KUV46_01485 (polA)
DNA repair and recombination proteins [BR:
tmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KUV46_01485 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KUV46_01485 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
WHD_BrxR
NYN_YacP
DYW_deaminase
Motif
Other DBs
NCBI-ProteinID:
QYJ01078
LinkDB
All DBs
Position
302577..305369
Genome browser
AA seq
930 aa
AA seq
DB search
MPTAPINEDSHLYLIDASAYIFRAFHALPPLSRASDGLPVGAVAGFCNMLWKLLEELKGD
ERPTHFACIFDKGSYTFRNDLYPDYKANRDEPPEDLRPQFPLVREASIAFACHALELEGY
EADDLIATYARQAEAKGARVTIVSSDKDLMQLVTDKITMLDTMKNKTLGRDEVFEKFGVG
PEKVVDVQSLAGDSTDNVPGAPGIGVKTAAQLLDEYGTVEELLARAEEIKQPKRRQTLID
HAEQVRISKKLVQLDENVPVEVPVEDLAVCDPDPKTLIDFLEKMEFRTITRRVRETFEAD
GVIEETTAGDIGFDRDAYTCIRDFKTLEDWIARAYEAGVIGVDCETNSLDCQTCDLVGVS
IAIAPNEAAYIPLGHIDPDHSGGDDMFDAAPPRQVRKEDALAALKPLLEDPAVLKVGQNF
KYDLTVFHRNGIEVAPVDDTMLISFALHAGMHGHGMDELSERYFSHTPIPFKEVCGSGQK
QITFDRVALDKATEYAAEDADVTLRLWTYLKPFLHKEKVTTVYETLDRPLIPVLADMERH
GIKVDRDFLSRLSADFQQRMAGYEDAAYKAAGTEFNMGSPKQLGDILFGEMGLPGGKKTK
SGAWSTDASQLETLAAEGHELPQIILDWRTLSKLRSTYTEALQDAINPNTKRVHTSYSMA
GAQTGRLSSTDPNLQNIPIRTEEGRKIREAFIAEDGNVIISADYSQIELRLLAHIANIDA
LKTAFNEGLDIHAMTASEMFDTPIEGMDPMVRRRAKAINFGIIYGISAFGLANQLGIDRG
EASDYIKAYFQKFPGIRKYMDETKEFAKDNLYVQTAFGRKLHLKDMNSKNGAMRAFSERQ
AINAPIQGSAADIIKRAMIEMPGALAAKKLDAKMLLQVHDELVFECPEDQAEDTIEVIRR
VMQKAPLPALDLSVPLDVDANAAKTWAEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgcgccgatcaatgaagacagccatctctacctgatcgatgcgagcgcatac
atcttccgcgctttccatgccctgccgcctctgagccgcgcatctgacggcctgcccgtc
ggcgcggtcgccggtttctgcaacatgctctggaagcttctggaagagctgaaaggcgat
gaacgcccgacccattttgcctgtatcttcgacaagggcagctacacgttccgcaatgac
ctctatcctgactacaaggccaaccgggatgagccgcctgaggaccttcgcccgcaattc
ccgctcgtgcgcgaagcctccatcgcctttgcctgccatgcgctggagcttgaaggctat
gaggccgacgacctgatcgcgacctatgcccgccaggccgaagccaagggcgcgcgtgtc
accatcgtctcctcagacaaggacctgatgcagctggtgaccgacaagatcaccatgctc
gacacgatgaagaacaagacgctcgggcgcgacgaggtcttcgagaagttcggcgttggc
ccggaaaaggtcgtcgatgtgcagtcgcttgcaggcgatagcacggacaacgtccccggc
gcgcccggcatcggcgtgaagaccgccgcccagctgctcgatgagtacggcaccgtcgag
gagcttctggcccgcgccgaagagatcaagcagcccaagcgccgtcagaccctgatcgac
catgccgaacaggtccgcatctcgaaaaagctcgtccagcttgatgagaatgtgcccgtc
gaagtcccggtcgaagacctcgccgtctgcgacccggacccgaaaaccctcatcgacttc
ctcgaaaagatggagtttcgcaccatcacccgccgcgtacgcgaaacgttcgaggctgac
ggcgtcatcgaggaaaccactgcaggcgatatcggcttcgaccgcgatgcctatacctgc
atccgcgacttcaagaccctcgaggactggatcgcccgcgcctatgaggcaggcgttatc
ggtgtcgattgcgagaccaacagcctcgactgccagacctgcgaccttgtcggcgtttcc
atcgccatcgcgccgaatgaagcggcctacatcccactcggccatatcgacccggaccat
tctggcggtgacgacatgttcgacgctgccccgccacgtcaggtccgcaaggaagacgcg
ctcgccgcgctcaaacccctgctcgaagacccggccgtcctgaaagtcggccagaacttc
aaatacgacctcaccgtcttccatcgcaacgggattgaggtcgcgcctgtcgatgacacg
atgctgatctctttcgcgctgcatgccggcatgcacggccacggcatggatgagctgtcg
gaacgctatttcagccacacgcccatccccttcaaggaagtgtgcggctcgggacagaag
cagatcacctttgaccgcgtcgccctcgacaaggcgaccgaatacgccgccgaggatgcc
gacgtcacccttcgcctctggacctacctcaagccctttctccacaaggagaaggtcacc
actgtctatgaaacgctggatcgtccgctgatccctgtcctcgccgacatggagcgccac
ggcatcaaggtggaccgcgacttcctctcgcgcctgtctgccgacttccagcagcgcatg
gctggctatgaagacgccgcctacaaggctgcgggcaccgaattcaacatgggctccccc
aaacagctgggcgatatcctcttcggagagatgggcctgcccggcggcaagaagacgaaa
tccggcgcatggtcgaccgacgcaagccagcttgaaaccctcgccgccgaaggccacgaa
ctgccccagatcatcctcgactggcgcaccctttcaaagctgcgctcgacctatacagag
gccctgcaggacgcgatcaacccgaacaccaagcgcgtccacacgtcctactccatggcg
ggcgcacagacgggccgtctctcctcaaccgatccgaacctccagaatatcccgatccgc
accgaggaaggccgcaagatccgcgaagccttcatcgccgaagacggaaacgtcatcatc
agcgccgactacagccagattgagcttcgcctgctggcgcatatcgcaaacatcgacgcg
ctaaagaccgccttcaatgaaggcctcgacattcacgccatgacggccagcgagatgttc
gacacaccgatcgaaggcatggacccgatggtgcgccggcgcgccaaggcgatcaatttc
ggcatcatctacggcatttctgccttcggccttgccaaccagctcggcatcgaccgggga
gaggcctcggactatatcaaggcctacttccagaaattccccggcatccgcaaatacatg
gatgagaccaaggaattcgcgaaggacaatctctacgtccagaccgcctttggccggaag
ctgcacctgaaagacatgaactccaagaacggcgccatgcgcgccttttcagagcgccag
gctatcaacgccccgatccagggctcggctgccgacatcatcaaacgcgccatgatcgaa
atgccgggcgcgctggcggccaagaagctcgacgcaaagatgctgctacaagtccacgac
gaactcgtcttcgaatgccccgaggaccaagccgaagacaccatagaggtgatccggaga
gtgatgcagaaagcgccgcttcccgcactggacctgtcggtcccactggacgtcgacgcc
aacgcggcgaagacatgggctgaggctcattag
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