Thalassovita mediterranea: KUV46_04320
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Entry
KUV46_04320 CDS
T07443
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tmd
Thalassovita mediterranea
Pathway
tmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUV46_04320 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmd03019
]
KUV46_04320 (recQ)
03400 DNA repair and recombination proteins [BR:
tmd03400
]
KUV46_04320 (recQ)
Enzymes [BR:
tmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KUV46_04320 (recQ)
Messenger RNA biogenesis [BR:
tmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KUV46_04320 (recQ)
DNA repair and recombination proteins [BR:
tmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KUV46_04320 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
HHH
HHH_5
FR47
Motif
Other DBs
NCBI-ProteinID:
QYJ01624
LinkDB
All DBs
Position
complement(900505..902346)
Genome browser
AA seq
613 aa
AA seq
DB search
MSVTNSEIASETPLSLLKRVYGYDAFRGLQADVIDDVMAGRDTLAVLPTGGGKSLCYQIP
AILRDGVGLVVSPLIALMADQVDALKALGVRAERLDSSMAPEDKQAALEAARRGEMDMLY
VSPEALGTGLAGVLVRLGVSVIAIDEAHCVSQWGHDFRPDYRALSRLKQLFPGVPRIAVT
ATADERTRDDILHELDLTSPQVHVASFDRPNLTLGAEPKAGKRADRVASLAKAHSGESGI
VYAATRDATEMLAESLERAGLSALAYHAGLDPEVRAERQRRFLLEDGIVMCATVAFGMGV
DKPDVRFVIHADPPKTLEAYWQEVGRAGRDGKPAEAFALFGPADMRRSISWTVESDAAEE
VKRVQLTKTRQLFAFLNGTECRRGAVRRYFGEENVAPCGECDNCQREPGEGFDATRFAQM
AVSAVIRCGQRIGRGRLIIHLTGSARDGFDEDLAQLSTYGIGTDLSKQGWSAVFDELLFS
GLLAETGDAMRPVLAVPDQEAARALFKGDREVWLRTDPSQRKTTRKRSGMAAAAVHDLSE
RDQSLFEALRNWRLETAKAKGVPPYVIFHDRTLAAIAAERPASGDELRNISGVGEKKAGR
YADDIARIVAEAA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcacaaactccgaaatcgcatcagagacgccgctttccctgttgaagcgggtc
tatggctatgacgctttccgggggctgcaggctgacgtcatcgacgatgtgatggcgggc
cgtgacacgctggccgtgctgccaacaggcggcggcaagtcgctctgctaccaaataccc
gctatcctgcgcgacggcgtcggtctcgtcgtctcgccgctcatcgcgctgatggcagac
caggtcgatgcgctgaaggcgctcggtgtgcgcgctgagcggctggattcttcgatggcg
cctgaagacaagcaggccgcgctcgaagcggcgcgccgcggcgagatggatatgctctat
gtctcaccagaggcgcttggtaccggcctcgctggcgttctcgtacggctcggcgtttcg
gtgattgccattgatgaggcgcactgcgtcagccagtggggccacgacttccgcccggat
taccgcgccctgagccgcttgaagcagcttttcccgggcgtgccgcgtatcgccgtgacg
gcgacggccgatgagcgcacgcgcgatgatatcctgcatgagctcgacctcacctccccg
caggtccatgtcgcgagcttcgatcggccgaacctgacgctcggcgcagaaccgaaagcc
ggaaagcgcgccgaccgcgtggcgtctctcgcaaaggcccattccggcgagagcggcatc
gtctatgcggccacgcgcgatgcgaccgagatgctggctgaaagcctggagcgggcaggt
ctttctgcgctggcctatcatgccggcctcgacccggaagtgcgagcagagcgtcagcgc
cgcttcctgcttgaggacggcatcgtcatgtgcgccactgtcgccttcggcatgggcgtc
gacaagccagacgtgcgatttgtcatccatgctgacccgccaaagacgctggaagcttat
tggcaggaagttggccgcgcaggccgcgatggaaagcctgccgaggcctttgcgctgttt
ggcccggctgatatgcgccgctcgatcagctggacggtcgaaagcgatgctgccgaagag
gtcaagcgtgtccagcttacgaagacgcggcaactgttcgcgttcctgaatggaacggag
tgtcggcgcggcgctgtgcgacgctatttcggcgaggaaaatgtcgccccgtgcggggag
tgcgacaattgccagcgcgagccgggcgaggggttcgacgcaacgcgctttgcccagatg
gcagtctccgccgtcatccgctgcgggcagcgtatcggacgtggccgactcatcatccac
cttaccggatctgctcgcgacggcttcgatgaggacctcgcacagctgtctacgtacgga
attggaactgacttgtcgaaacagggctggagcgccgtcttcgacgagcttctcttctca
ggcctccttgctgagacgggtgatgcgatgcggccggtccttgccgtgccggaccaggaa
gcggcccgcgcgctcttcaagggtgaccgcgaagtctggctgcgcacggatcccagccag
cgcaagaccacacgcaagcgctctgggatggcggctgcggcagttcatgatctttccgag
cgcgaccagtccctcttcgaggcgctgcgcaactggcgtctagaaacagccaaggccaag
ggcgtgcccccttatgtgatcttccacgatcggaccttggccgcgatcgcggcagagcgg
cctgcatcaggcgatgaacttcgcaatatcagcggcgttggggaaaagaaggctggccgc
tacgccgatgatatcgctcggattgtggctgaagccgcctag
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