Thalassovita mediterranea: KUV46_07115
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Entry
KUV46_07115 CDS
T07443
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tmd
Thalassovita mediterranea
Pathway
tmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUV46_07115 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmd03019
]
KUV46_07115 (pnp)
03016 Transfer RNA biogenesis [BR:
tmd03016
]
KUV46_07115 (pnp)
Enzymes [BR:
tmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KUV46_07115 (pnp)
Messenger RNA biogenesis [BR:
tmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KUV46_07115 (pnp)
Transfer RNA biogenesis [BR:
tmd03016
]
Prokaryotic type
tRNA degradation factors
KUV46_07115 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_N4BP1_2nd
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QYJ02150
LinkDB
All DBs
Position
complement(1440521..1442656)
Genome browser
AA seq
711 aa
AA seq
DB search
MFDKQTVSLEWAGRTLTIETGRVARQADGAVLVTYGDTTVLATATFAKEAKPGQDFFPLT
VNYMEKYYASGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLFVDGFKNEVQVVLTAISY
DMENDPDIVGMIGASAALVLSGAPFMGPIGAARVGYKDGEYLINPTVDDLAESDLDLVVA
GTNDAVMMVESEAKELPEDVMLGAVMAGHDAMQPVIEAIIKLAEKAAKDPFEFEGEDLSG
ELKQIQDLVGADLSKAYQITEKLERQAAVGAAREKAAEALVATEEKPDGMSAQVFKSAFK
KAEASVVRGDIIKTGKRIDGRSLDQVRPIVAEAGFLPRTHGSSLFTRGETQAICVATLGT
SDDEQFIDGLGGTHKEKFMLHYNFPPYSVGETGRMGGAGRREIGHGKLAWRALKAVLPKA
EEFPYTIRLVSEITESNGSSSMATVCGCALAMMDAGVPIARPVSGIAMGLIKEDDGVAVL
SDILGDEDHLGDMDFKVAGTEVGVTSLQMDIKIAGITKDIMQTALDQAKGGRAHILGEMN
KALAESRGELSQNAPQMEIVNIPVDKIRDVIGSGGKTIRDIVDTTGAKLNVEDDGTIQIS
ALDRASIDAAKKRIRELTAEPEAGEIYEGKVVSIKDFGAFVNFFGPKDGLVHVSQMADER
IGHPKDLVKEGDTVWVKLMGFDDRGKVRLSMKAVDQETGKDKEAAEGGDAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataagcaaaccgtgtcgctggaatgggccggccgcacgttgacgatcgagacg
ggccgtgtcgctcgtcaggctgacggggccgtcctcgtcacatatggcgacacgacggtc
ctcgcgaccgcgaccttcgccaaagaggccaagccggggcaggacttcttcccgctcacg
gtcaactacatggaaaaatactacgcttcaggccgcatcccaggcggcttcttcaagcgt
gagggccgtccgaccgagaaagaaacgctgacttcgcgtctcatcgaccgcccaatccgt
ccgcttttcgtcgatggcttcaagaacgaagtccaggtcgtcctgacggcgatctcctac
gacatggaaaacgatccggatatcgttggcatgattggcgcctcggctgccctggtcctg
tccggtgcgccgttcatgggcccgatcggcgcagcacgcgtcggctacaaggatggcgaa
tacctcatcaacccaaccgttgatgaccttgcggaatccgatctcgacctcgtcgtcgct
ggcaccaatgacgccgtgatgatggttgaatccgaagcaaaagagcttcctgaagatgtg
atgctcggcgctgtcatggctggccatgacgccatgcagccggtgatcgaagcgatcatc
aagctggctgaaaaagctgccaaggacccgttcgagtttgaaggtgaagacctttcgggc
gagctgaagcagatccaggacctcgtcggcgcagacctctccaaggcttatcagatcact
gagaagcttgagcgtcaggctgctgttggcgctgcccgcgaaaaggctgccgaagccctc
gttgcaaccgaagagaagccagacggcatgagcgcccaggtgttcaagtctgccttcaag
aaagccgaagcctccgtggttcgcggcgacatcatcaagaccggcaagcgcatcgatggc
cgttcgctcgatcaggttcgcccgatcgttgccgaagctggcttcctgccacgcacgcac
ggttcctcgctcttcacccgcggtgaaacgcaggcgatctgtgtcgcgacgctcggcacc
tccgacgatgagcaattcatcgacggcctgggcggtacgcacaaagaaaagttcatgctg
cactacaacttcccgccttattcggtcggtgagacgggccgcatgggcggtgcaggccgc
cgcgaaatcggtcacggcaagctcgcatggcgcgcgctgaaagccgtcctgccaaaggct
gaagagttcccgtacacgatccgcctcgtttccgagatcactgagtccaacggctcgtcc
tcgatggcgacggtttgtggctgtgcgctcgcaatgatggacgcaggcgtgccaatcgca
cgtccggtgtccggcatcgcaatgggtctcatcaaggaagatgacggcgtcgccgttctt
tctgacatccttggtgacgaagaccacctcggcgacatggacttcaaggtcgctggtacc
gaagttggcgtcacatcgcttcagatggacatcaagattgctggtatcaccaaggacatc
atgcagaccgcgctcgatcaggcgaagggcggccgcgcccacatcctgggtgagatgaac
aaggcccttgcagagtcccgcggcgagctgtcccagaacgcaccgcaaatggaaatcgtg
aatatcccggtcgacaagatccgtgacgtgatcggttccggcggcaagacgatccgcgat
atcgtcgacacgacgggcgccaagctcaacgtcgaagacgatggcacgatccagatctct
gcgctcgaccgcgcttcgatcgatgctgccaagaagcgtatccgcgagctgacggcagag
ccggaagccggcgagatctacgaaggcaaagtcgtgtccatcaaggatttcggcgcgttc
gtgaacttcttcggtcccaaagacggcctcgtccacgtgtcgcagatggcagacgagcgc
atcggccacccgaaagacctcgtcaaggaaggcgacacggtctgggtcaagctgatgggc
ttcgatgaccgcggcaaggttcgcctgtcgatgaaagccgtcgatcaggagaccggcaag
gacaaggaagctgctgagggcggcgacgccgaataa
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