Thalassovita mediterranea: KUV46_12265
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Entry
KUV46_12265 CDS
T07443
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmd
Thalassovita mediterranea
Brite
KEGG Orthology (KO) [BR:
tmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmd03032
]
KUV46_12265
03400 DNA repair and recombination proteins [BR:
tmd03400
]
KUV46_12265
Enzymes [BR:
tmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KUV46_12265
DNA replication proteins [BR:
tmd03032
]
Prokaryotic type
DNA Topoisomerases
KUV46_12265
DNA repair and recombination proteins [BR:
tmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KUV46_12265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QYJ00109
LinkDB
All DBs
Position
2502182..2503159
Genome browser
AA seq
325 aa
AA seq
DB search
MPFSLARESLDPADAGLVYVCSSEPGWTRRPHGRGFTYLDEQGDVLKGDDRERAEALVLP
PAWADVWICKQPKGHLQATGKDEAGRTQYRYHEDWRAHCEGVKFSDMLAFGSALPRIRKR
VKAVLEDPEDHVELATAAIVRLLDKGAIRVGSERHARNGTFGASTLYKRHVRQTDEDTIR
LKFKGKGGKEQEVSICDESLAHAVGELQCLPGQSLFDTPDGHVGSTRVNRFIRDAGDGGF
TAKDFRTWAGSVAAVEALRKGASSIKGISEAAAERLGNTPTIARNSYIHPKLVEMARNGE
TPDAEAGPVRLRKDERRLYAVLEEG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcctttctcactcgcccgcgaatctctcgaccctgctgatgcgggtctcgtctatgtc
tgcagctcggagcctggctggacgcgccgcccgcatggtcgcggcttcacctatctcgac
gagcagggcgatgtcctgaagggtgacgacagggagagggcggaagcgctcgtcctgccg
ccagcctgggccgatgtctggatatgcaagcagccgaagggccatcttcaggcgaccggc
aaggacgaggccgggcgcacacaataccgctatcatgaggactggcgcgcccattgtgag
ggcgtaaagttctctgacatgcttgcttttggcagtgccttgccgcgtatccgcaaacgc
gtgaaggccgtgcttgaagaccctgaagaccatgttgagctcgccactgccgccatcgtc
cgcctgctcgataagggtgccatcagggtcggctctgagcggcacgcaaggaacggcact
ttcggtgcgtcgacgctctacaagcgccacgttcgccagacggacgaagacaccatccgc
ctcaagttcaaaggcaagggcggcaaggagcaggaagtctccatttgcgatgaaagtctt
gcccatgccgttggtgaactccagtgcctgccgggacagtcgctctttgacacgccggat
gggcatgtcggatcgacccgtgtgaaccgttttatccgggacgcaggggacgggggattt
acggcgaaggattttcgcacatgggctgggtcagttgctgctgtcgaagcgctccgcaaa
ggcgcgagcagcatcaagggcatttccgaagccgccgcagagcggctcggcaatacgcca
accatcgcccgtaattcgtatatccatccaaagctggtggagatggcccgcaacggcgaa
acgccggatgctgaggccgggccggttcgcctacgcaaggatgagcgcaggctgtacgcg
gtgcttgaggaaggctga
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integrated database retrieval system
