Thalassovita mediterranea: KUV46_12290
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Entry
KUV46_12290 CDS
T07443
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tmd
Thalassovita mediterranea
Pathway
tmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUV46_12290 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmd03019
]
KUV46_12290 (groL)
03110 Chaperones and folding catalysts [BR:
tmd03110
]
KUV46_12290 (groL)
03029 Mitochondrial biogenesis [BR:
tmd03029
]
KUV46_12290 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tmd04147
]
KUV46_12290 (groL)
Enzymes [BR:
tmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KUV46_12290 (groL)
Messenger RNA biogenesis [BR:
tmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KUV46_12290 (groL)
Chaperones and folding catalysts [BR:
tmd03110
]
Heat shock proteins
HSP60 / Chaperonin
KUV46_12290 (groL)
Mitochondrial biogenesis [BR:
tmd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KUV46_12290 (groL)
Exosome [BR:
tmd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KUV46_12290 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KUV46_12290 (groL)
Exosomal proteins of breast cancer cells
KUV46_12290 (groL)
Exosomal proteins of colorectal cancer cells
KUV46_12290 (groL)
Exosomal proteins of bladder cancer cells
KUV46_12290 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QYJ00114
LinkDB
All DBs
Position
complement(2505845..2507500)
Genome browser
AA seq
551 aa
AA seq
DB search
MAAKHVKFSTDARERMLKGVDTLANAVKVTLGPKGRNVVIEKSFGAPRTTKDGVTVAKEI
ELEDKFENMGAQMLREVASKANDVAGDGTTTATVLAQAIVREGMKRVSAGMNPMDLKRGI
DKAVAEVISDLAHHSRKVKENSEIAQVGSISANGDKEIGDMIAHAMEKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYLSPYFVTNPEKMAVELEDPYILLHEKKLSSLQPMLPILEQV
VQSQRPLLIIAEDVDGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLQDIAVLTGGQV
ISEDLGIKLENISLDMLGTAKKVEIDKDNTTIVDGAGSKDEIEARVGQIKKQIEDTSSDY
DKEKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALSATRAAVEEGVIPGGGSALL
RAAQNIDVKGENPDEQAGIDIVRRALEAPIRQIVNNAGLEGSVVVANVLANKDRAYGFNA
QTEEYGDMYKMGIIDPAKVVRSALQNAASVAALLITTEAGIAEAPKKEGEGGGMPDMGGM
GGMGGMGGMGF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaacacgtaaagttcagcacggatgcgcgcgagcgcatgctgaagggcgtc
gacacgctcgcaaacgctgtaaaagtcaccctcggccctaaaggccgtaacgtcgtcatc
gagaagtccttcggcgcaccgcgcacgaccaaggatggcgtcaccgtcgccaaggaaatc
gagcttgaggataagttcgagaacatgggcgcacagatgctgcgcgaagttgcttccaag
gcaaacgacgttgctggcgacggcaccacgaccgcgacggttctcgctcaggccatcgtc
cgcgaaggcatgaagcgcgtttccgccggcatgaacccgatggacctgaagcgcggtatc
gacaaggccgttgctgaagtgatctccgacctcgcgcatcattcgcgcaaggtgaaagag
aattccgaaatcgcacaggtcggttcgatttccgccaatggcgacaaggaaatcggcgac
atgatcgcgcatgcgatggagaaagtcggcaatgaaggcgtcatcacggtcgaggaagca
aaatccctcgaaaccgaactcgacgtcgtcgaaggcatgcagttcgaccgcggctacctc
tccccgtacttcgtgacgaacccggagaagatggctgtcgaactcgaagacccatacatc
ctgctgcacgagaagaagctttcttcgctccagccgatgctgccgatcctcgagcaggtc
gttcagtcccagcgcccactgctgatcatcgctgaagacgtcgatggcgaagccctcgca
acgctcgtcgtcaataagctgcgcggcggcctcaaggttgcagctgtgaaggcccctggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgctgtcctcaccggtggccaggtc
atctccgaagacctcggcatcaagcttgagaacatctcgctcgacatgctcggcaccgcc
aagaaagtcgagatcgacaaggacaacaccacgatcgtcgatggtgctggttccaaggac
gagatcgaagcccgcgttggccagatcaagaagcagatcgaagacacctcttcggactat
gacaaggagaagctccaggagcgccttgccaagctcgctggcggtgttgccgtgatcaag
gtcggcggcgcaaccgaagtcgaagtgaaagagcgtaaggaccgcgtcgacgacgccctc
agcgcaacccgcgctgctgtggaagaaggcgtgatcccgggcggtggctctgccctgctc
cgcgccgctcagaatatcgacgtgaagggtgagaacccagacgagcaagccggtatcgac
atcgttcgccgcgccctcgaagcgccgatccgtcagatcgtcaacaatgccggtctcgaa
ggctctgtcgtcgttgcaaacgtccttgccaacaaggatcgcgcatacggcttcaacgcc
cagaccgaagagtatggcgacatgtacaagatgggcatcatcgacccggcaaaggtcgtg
cgctctgcccttcagaacgctgcttccgtcgcggccctgctgatcaccaccgaagctggt
atcgccgaagcgcctaagaaagaaggcgaaggcggtggcatgccggacatgggcggcatg
ggcggcatgggtggcatgggcggtatgggcttctaa
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