Thalassovita mediterranea: KUV46_13885
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Entry
KUV46_13885 CDS
T07443
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tmd
Thalassovita mediterranea
Brite
KEGG Orthology (KO) [BR:
tmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmd03032
]
KUV46_13885
03036 Chromosome and associated proteins [BR:
tmd03036
]
KUV46_13885
03400 DNA repair and recombination proteins [BR:
tmd03400
]
KUV46_13885
DNA replication proteins [BR:
tmd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KUV46_13885
Chromosome and associated proteins [BR:
tmd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KUV46_13885
DNA repair and recombination proteins [BR:
tmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KUV46_13885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
DUF937
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QYJ00412
LinkDB
All DBs
Position
2842220..2842486
Genome browser
AA seq
88 aa
AA seq
DB search
MNKGELTKAVAESAGMSQADAGKAVDAVFDTISGAVKDRKQVAIAGFGTFHAKTRGAREG
RNPATGETIQIPEKTSGAFKPASALKDI
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgaataagggtgaacttacgaaagccgtcgcagaatctgctggcatgtcacaagcagac
gccggcaaagcggtggacgcagtcttcgacaccatctctggcgcagtgaaagaccgcaag
caggtcgctatcgctggttttggtaccttccacgccaagacccgcggcgctcgtgaaggc
cgtaacccggcaaccggcgaaacgatccagatccctgaaaagacgtctggtgctttcaag
cctgcttcggctctgaaagacatctag
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integrated database retrieval system
