Thalassovita mediterranea: KUV46_14545
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Entry
KUV46_14545 CDS
T07443
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmd
Thalassovita mediterranea
Brite
KEGG Orthology (KO) [BR:
tmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmd03032
]
KUV46_14545 (topA)
03400 DNA repair and recombination proteins [BR:
tmd03400
]
KUV46_14545 (topA)
Enzymes [BR:
tmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KUV46_14545 (topA)
DNA replication proteins [BR:
tmd03032
]
Prokaryotic type
DNA Topoisomerases
KUV46_14545 (topA)
DNA repair and recombination proteins [BR:
tmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KUV46_14545 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QYJ00536
LinkDB
All DBs
Position
2972693..2975275
Genome browser
AA seq
860 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGKDYKVLASYGHVRDLPSKDGSVDPDNDFEMVWQADSKSAS
RIRDIAEATKSADKLILATDPDREGEAISWHLLEALEKRKALKGIPVERVVFNAITKNAV
TTAMEQPREIDQELVDAYLARRALDYLVGFNLSPVLWRKLPGSRSAGRVQSVALRIICQR
ELEIETFQPQEYWSIEADLRAKDGTSFKARLHALDGDNLKKFSLPDEKSATAALEAVKVG
GYTVSSVESKPVKRNPPPPFITSTLQQEASRKLGFTAKRTMGAAQKLYEEGRITYMRTDG
INMAEEAYHSSRKQIESDYGARYLPEKPRRYSSKAKNAQEAHEAIRPTDFSIRPEEYRGD
GDLKKLYTLIWRRAVASQMEAAIFERTTLDFMSKDGRAQLRATGQVVQFDGFIKLYTEGR
DDGDEDEDAEGRLPKMNERDHADLIEAKSDQHFTQPPPRFTEASLVKRLEELGIGRPSTY
ASTLSTLEDRDYVRLEKKQLIPEDKGRLVTAFLENFFARYVEYDFTAELEEQLDVISDGK
LDWKAFLREFWVQFQAAIAETKELRVSNVLDALNEALGPYVFPKTDENGNPKENPRECPL
CGEGELSLKLGRHGAFVGCSRYPDCKFTRPFSTDSEQEGAINPEGEELGLHPETGEAVFL
KTGRFGPYVEMAGGEDDKPKRTSVPKGWDAKALTLDQGVKLLSLPRDVGEHPDDGEMIRA
NLGRYGPYVQHQRTFANVQTIEELFDIGLNRAVTLIEDKKAKRGGGRGATPLKELGKHPA
DDEPIHVYEGRYGPYVKHKKTNATLPKDVTPDTVTLEQAVELIDAKAKKPAKKKAPAKKK
PAAKKKPAAKKTAKSKTDDA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtcgttgtcgagtcgccggcgaaagcgaagacgatcaacaagtatcttggc
aaggactacaaggtcctcgcctcgtacggccatgtccgtgaccttccctccaaggacggc
tcggtcgatcctgacaatgactttgagatggtctggcaggccgactccaaatcggcgagc
cgcattcgcgatatcgccgaggcgaccaagtccgccgacaagctcattctcgcgactgac
cctgatcgcgaaggcgaagccatcagctggcaccttctggaagcgctggaaaagcgtaag
gcgctgaaaggcattccggtcgagcgcgtcgtctttaacgcgatcaccaagaatgcagtg
accaccgcgatggagcagccgcgtgagatcgatcaggagctagtcgacgcctatcttgcc
cgccgcgcgctcgattacctcgtcggcttcaatctctctccggttctctggcgcaagctt
ccagggtctcgttctgctggccgcgtccagtccgtcgccctgcgcatcatttgccagcgt
gagctcgagatcgagactttccagcctcaggaatactggtccatcgaagcagatcttcgc
gcaaaggacgggacgagcttcaaagcccgcctgcatgccctcgatggcgacaacctcaag
aagttctcacttcccgatgagaagagcgcgaccgctgccctcgaagcggtgaaagtcggc
ggctatacggtcagctcggttgaatcgaagccggtcaaacgcaacccgccgccgcccttc
atcacctcgaccctgcagcaggaagcctcccgcaagctcggctttacggccaagcggacc
atgggcgcggcgcagaagctctacgaggaaggccgcatcacctatatgcggaccgacggc
atcaacatggccgaagaggcctaccattcctcgcgcaagcagatcgaaagcgactatggc
gcccgatacctgccggaaaagccgcgccgctattcgtccaaggccaagaatgcgcaggaa
gcccacgaggccatccgcccaaccgatttctccatccgcccggaagagtatcgaggcgat
ggcgacctgaaaaagctttacacgctcatctggcgccgcgctgtcgcctcacagatggaa
gcggcaatctttgagcgcaccacgctcgacttcatgtcgaaagatggccgcgcacagctt
cgcgcaaccggccaggtcgtccagtttgacggcttcatcaagctctacactgagggccgc
gatgatggcgacgaggatgaagatgccgaaggccgcctgccgaagatgaatgagcgtgac
cacgccgacctcatcgaagccaaatctgaccagcacttcacccagccgccgccgcgtttc
actgaagcttcgctcgtcaagcggctggaagagctcggcatcgggcgtccttcgacctat
gcgtccaccctgtcgacgctggaagaccgcgattatgtgcgccttgagaagaaacaactg
atccctgaagacaagggccgtctcgtcaccgccttcctcgaaaactttttcgcgcgctac
gtcgagtacgacttcaccgcagagcttgaagaacagctggacgtcatttctgacggcaag
ctcgactggaaagcattcctgcgtgagttctgggtccagttccaggcagcgatcgcggag
acgaaagagcttcgcgtttcaaacgtgctggacgccttgaatgaagcactcggcccttac
gttttcccgaagacggacgagaacggcaatccgaaagaaaacccgcgcgaatgtccactt
tgcggcgaaggcgaactgtctctaaagcttgggcgccacggcgctttcgtcggctgttcg
cgctatccagactgcaagttcacccgccccttctctaccgatagcgagcaggagggcgcc
atcaatccggaaggcgaagagctcggcctgcatccggaaactggagaggcggtcttcctc
aagaccggcaggtttggcccctatgtcgaaatggccggcggtgaggacgacaagcccaaa
cggaccagcgtgccgaagggttgggacgccaaggcactgacactggatcagggcgtgaag
ctgctttcgctgccgcgcgatgtgggggagcaccctgatgatggcgagatgatccgagcc
aatctcggccgctatggtccctatgtgcagcaccagcgcaccttcgcgaacgtgcagacc
attgaggagctgttcgatatcggcctcaaccgcgcagtgacgctgatcgaagacaagaaa
gcaaaacgcggcggtggccgcggcgcgaccccgctcaaggagcttggcaagcacccggcg
gacgacgaaccgatccacgtttatgagggccgctacgggccttatgtgaagcacaagaag
acgaacgcgaccctgccaaaggacgtgacgccagatacggtcacgctggaacaggccgtc
gagctgattgacgcgaaggcgaaaaagccggccaagaaaaaggccccggcgaagaagaag
cctgccgccaagaaaaagcccgcagcgaagaagacggcgaagtcaaagacagacgacgcg
taa
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