Thermosipho melanesiensis: Tmel_0052
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Entry
Tmel_0052 CDS
T00550
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tme
Thermosipho melanesiensis
Pathway
tme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tmel_0052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tme03019
]
Tmel_0052
03110 Chaperones and folding catalysts [BR:
tme03110
]
Tmel_0052
03029 Mitochondrial biogenesis [BR:
tme03029
]
Tmel_0052
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tme04147
]
Tmel_0052
Enzymes [BR:
tme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Tmel_0052
Messenger RNA biogenesis [BR:
tme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Tmel_0052
Chaperones and folding catalysts [BR:
tme03110
]
Heat shock proteins
HSP60 / Chaperonin
Tmel_0052
Mitochondrial biogenesis [BR:
tme03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Tmel_0052
Exosome [BR:
tme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Tmel_0052
Exosomal proteins of other body fluids (saliva and urine)
Tmel_0052
Exosomal proteins of breast cancer cells
Tmel_0052
Exosomal proteins of colorectal cancer cells
Tmel_0052
Exosomal proteins of bladder cancer cells
Tmel_0052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
4HB_MCP_1
DUF7342
CitX
REF
Motif
Other DBs
NCBI-ProteinID:
ABR29931
UniProt:
A6LJ30
LinkDB
All DBs
Position
complement(55681..57300)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKMLRFSEEARRALERGVDAVADAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIE
LEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGIKNVTAGANPILVKRGID
KAVAAAVEKIKDISKKLSNSDDIAHVASISANSEEIGKLIAEAMEKVGEDGVITVEDSKS
IDTFVEFTEGMQFDRGYISPYFVTDPEKMEVVYNEPFILITDRKLSNIKPLIPILEKVAQ
TGKPLVIIAEDVEGEALTTLVLNKLKGTLNTVAVKAPGFGDRRKAMLQDIAILTGGIVAS
EEVGINLEDLTLNDLGRADVVRVKKDETIIVGGHGDQEEIKKRIAQIKAQIEQTTSEYEK
ETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRA
RKPVEKIVEELDGDEKIGAKIVYEALSAPINQIAKNAGYDGAIIIHKVLEQDDPAYGFDA
LKGEYCDMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEPKNNNPMPEMPEY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatgttaagatttagtgaagaagcaagaagagctcttgaaagaggtgtagat
gcagttgcagatgcagttaagattacgttaggaccaaaaggtagaaacgtagttattgaa
aaatcctggggaagccctacgattacaaatgatggtgtttcaattgcaaaggaaatagaa
cttgaagataaattcgaaaatcttggtgcacaacttgtaaaagaagttgcaagtaaaaca
aacgacgtagcaggtgatggtacgacaacagctacagttcttgctcaagcaatgattaag
gaaggtattaaaaacgttacagcaggtgcaaatccaattcttgtaaaaagaggaattgat
aaggcagtagcagctgcagttgagaaaatcaaagatatttcaaaaaaattatcaaattct
gatgatattgctcacgtagcatccattagtgcaaacagtgaggaaattggaaaattaatt
gctgaagcaatggaaaaagttggagaagatggagttattaccgtagaagatagtaaatca
attgatacgtttgttgaatttacagaaggtatgcaatttgacagaggatatatttctcca
tatttcgtaacggaccctgaaaaaatggaagttgtatacaatgaacctttcattcttatt
acagatagaaaactttcaaatataaaaccattaataccaatccttgaaaaagttgcgcag
acgggaaaaccattggtaataattgcagaggatgttgaaggtgaagcattaacaacactt
gtacttaataaactaaaaggcacacttaatacggtagcagtaaaagctcctggttttgga
gataggagaaaagcaatgcttcaagatatagcaatccttactggtggaattgtggcaagt
gaagaagttggaattaatcttgaagatttgacattgaatgatcttggaagagcagatgtt
gtaagagtaaagaaagacgaaacaatcattgtaggaggtcacggagatcaagaagagatt
aagaagagaattgctcaaattaaggcacaaattgaacaaacaacatctgaatatgaaaaa
gaaacattacaagaaagaatggcaaagcttgcaggtggtgtagcagtaattaaagttgga
gcagcaacagaaacagaattaaaagaaaagaaacacagaattgaagatgcgttatctgca
acaagggcagcagttgaagaaggtattgttccaggtggaggaattacactacttcgtgca
agaaaaccggttgaaaaaattgttgaagaattagatggtgatgaaaagattggtgcaaag
attgtttacgaagcattgagtgctcctattaatcaaattgcaaagaatgcaggttacgat
ggtgcaattattatccacaaagttcttgagcaagatgatccagcgtacggttttgatgcg
ttaaaaggagaatactgcgatatgtttgaacgtggaattattgatcccgcaaaagttaca
agaagtgcacttcaaaacgcagcatcaattgcaggtatgctccttacaacagaagtactt
gtagttgaaaaaccagaaccaaaaaacaataacccaatgccagaaatgccagaatattaa
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