Thermosipho melanesiensis: Tmel_0276
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Entry
Tmel_0276 CDS
T00550
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tme
Thermosipho melanesiensis
Pathway
tme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tmel_0276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tme03400
]
Tmel_0276
Enzymes [BR:
tme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tmel_0276
DNA repair and recombination proteins [BR:
tme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tmel_0276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_CRR
Helicase_C
PriA_C
PriA_3primeBD
Trm112p
Kinesin
zinc-ribbons_6
AAA_30
T2SSE
AAA_7
zinc_ribbon_12
Motif
Other DBs
NCBI-ProteinID:
ABR30148
UniProt:
A6LJP7
LinkDB
All DBs
Position
complement(284826..287054)
Genome browser
AA seq
742 aa
AA seq
DB search
MNYEVAISNKSFRKTFLVKSEFVVEKGERVLVRLNNKKEIGYVLDRKKGNFVGEIISKVD
GKSFLRGWLVDAVVEASSFFGAPVGKLFDLCFPKGLENYFVERVYSNNPLYDFNGINLNE
FVEKYGEKKLKELLKNDAVYIKKDFNLKAPNPRKELYVYLKASLSEISEKKLTKKQKKVV
DYLLVNDIVSYTELREFLGINKDVLLQLKRKDILIIDKKIPQKVGRVLLSDNQKKVVEDI
LNASSSKVLLYGVTGSGKTEIYLSVIEQTNYKALYLVPEVSLIEQTVRRIYARLPEKKVG
IYHSYLTKSQKIDVWMRAVKGDIDILVGTRSAFFVPFDMDMIVVDEEHDESYYQDGEVIY
DVNFLIERFPGLVIFGSATPRLDHYMEAKNGNMKLCILKERYGTKLPNVEIINMKEEKKV
IPYVSEVVVESVKKELESGKSVILFVRRKGYSLIMCQNCGHILKCPNCDVSLTYHKAEGK
LKCHICGFEASRYMVCPNCGSVLFYEKGLGTERIELEFQKLFPGRNIVRVDTEVVRDFKK
FQVILKKLYSGEIDVLVGTKMITKGLDVPTVNLIGVIDVDAIQNIPDYNSSLNLFRLLVQ
VVGRAGRKERGRAFVQTYEKDSEVISYALKQDVEGYYEYELKKRKDLRYPPFQNIIQVIV
FSKDKNLGYENTKKIVEELRKHNLEILGPTEFFIPKIKNNFLYHFIVKTNEVKRVNTLIL
EIISKFPTKIKLRVNPPSLYTI
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatgaagttgctatatcaaacaaaagtttcagaaaaacatttttggtaaaatct
gaatttgttgttgaaaaaggtgaaagagttcttgttaggttaaataataaaaaagaaata
ggatatgttttggatagaaaaaagggaaattttgttggagaaataattagtaaggttgat
ggaaaaagttttttgagaggatggttggtggatgctgttgtagaagcatccagttttttc
ggtgcgcctgttggaaaattgtttgacttgtgttttcccaagggattagaaaattacttt
gttgaaagggtttattcaaacaatcctttatatgattttaatggaattaatctgaatgaa
tttgtagaaaaatatggtgaaaaaaaattaaaagagcttttaaaaaatgatgctgtatat
ataaagaaagattttaatctaaaagcaccaaaccctagaaaagaattgtatgtttatcta
aaggcatctttaagtgagatttcagaaaaaaaattaactaaaaaacaaaaaaaagtggta
gattatttgcttgtaaatgatatagtgtcatatactgaacttagggaatttttgggaatt
aataaggatgttttattacaacttaaaagaaaagacattttgataatagataaaaaaatt
cctcaaaaagttggaagagttttgttaagtgataatcaaaaaaaagtagttgaggatata
ttaaacgcttcttcctcaaaagttttgttgtatggtgttacaggtagtgggaaaacggag
atctacctttcagttatagaacaaacaaactacaaagctttatatcttgttccagaagtt
tcattaattgaacaaactgtaagaagaatttatgcaaggcttcctgaaaaaaaagtagga
atttatcatagttatcttacaaaaagccagaaaatagatgtatggatgagagcagttaag
ggggatatagatatattggttggtacaaggagtgcattttttgtgccatttgatatggat
atgatagtggttgacgaagagcatgatgaaagttactatcaagatggggaagtaatatat
gatgtaaattttttaattgaaagatttccgggacttgtaatatttggttcggcaactcca
cggttggatcattatatggaagcgaagaatggtaatatgaagctttgtattttgaaagaa
aggtatggtacaaaacttccaaatgttgaaattattaacatgaaagaagaaaaaaaagtt
attccgtatgtttctgaagttgttgtagaaagtgtgaaaaaggaattagaaagtggaaaa
agtgttattttgtttgttaggaggaagggatattccttaatcatgtgtcaaaattgtgga
catatattaaaatgtccaaattgtgatgtgtcattaacatatcacaaagcagaaggtaag
ctaaaatgtcatatatgtggttttgaagcttcaaggtatatggtgtgtcccaattgcggt
tccgtgttgttttacgaaaaaggcttgggaactgagagaattgagttagaatttcagaaa
ttatttcctggaagaaatattgtaagagttgatacggaagtggttagagatttcaaaaaa
tttcaggtgatattgaaaaaattgtattctggagaaattgatgtccttgtgggaacgaag
atgattacaaaaggattagatgttccaactgtaaacctaataggagttatagatgttgat
gctatacaaaatattcctgattataattcttcattgaatctttttagattgttagttcaa
gttgtgggaagggcgggtagaaaagaaagaggtagggcatttgtacaaacttacgagaaa
gatagtgaggttatttcgtatgcgttaaaacaagatgtggaaggatattatgaatatgag
ttaaagaaaaggaaggatttaagatatcctccctttcaaaatataatacaagttattgtg
ttttcaaaagataagaaccttgggtatgaaaacacaaagaaaatagttgaagaacttcgc
aagcacaatttagaaatattaggtcccactgaattttttatcccaaaaataaaaaataat
tttttgtatcactttattgtaaagacgaatgaggtgaaaagggtaaatacactaattttg
gaaattatatcaaaatttcctactaagattaaattgagggttaatcctccatctttatat
actatttaa
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