KEGG   Thermosipho melanesiensis: Tmel_0402
Entry
Tmel_0402         CDS       T00550                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tme  Thermosipho melanesiensis
Brite
KEGG Orthology (KO) [BR:tme00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tme02048]
    Tmel_0402
Enzymes [BR:tme01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Tmel_0402
Prokaryotic defense system [BR:tme02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Tmel_0402
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII DEAD RecX_HTH1 DEK_C
Other DBs
NCBI-ProteinID: ABR30271
UniProt: A6LK20
LinkDB
Position
complement(419495..422662)
AA seq 1055 aa
MSIGVNELEKKTQERVINFFVEVLGYDYLGNWEKREGNSNIEKEYLINFLRKQGYNDEVI
KKAIEKLKKISENQQKLLYDRNKEIYELLRYGTDVKIHPSEPSIHVNFIDWENPENNHFT
IAEEVTIRGRHTKRPDIVLYLNGIAIGVLELKRSSISISEGIRQNLDNQKKEFIQDFFTT
VQLIIAGNDTQGLRYGTIETPERYYLEWKEENPEYDHNKKTTIPRALPRDKCEVSDNILD
CDIYRLLNKNRLLEIIHDFIIFDAGIKKVPRHNQYFAVKAAQKSIKKREGGIIWHTQGSG
KSLIMVWLAKWIIENISDSRVLIVTDRIELDEQIEKVFKGVGENIYRTKSARDLIEQLNR
KDENLMCSLIHKFGKAEATDKDYDEYIHELKVTLPRDFKPKGNIFVFVDECHRTQSGKLH
KAMKEILPNAVFIGFTGTPLLKKDKPTTLETFGKYIHTYKFDEGVQDGVILDLRYEARDV
DIKVVSEDKIDKWFEVKTKGLSDIAKAQLKERWGTLKKLYSSRSRMEKIVADIIFDFETK
PRLATGRGNAMLVAGSIYEACKYYELFKSRGFDKVAIVTSYRPSIVSIKGEETGEEGEAE
NIKKYEIYKKMIADYYNISEEEAVKDYRIEKFEKDVKKKFIEEPGQMKLLIVVDKLLTGF
DAPSATYLYIDKPMRDHGLFQAICRVNRLDNKDKGDELDKDYGYIVDYRDLFNSMEKAIK
DYTSGAFAEFDKEDVEGLLKDRLTDAKKRLDEVLEKVELLVEGVKPPKGINEYREYFVGD
NSEEKQQLRLEFYKRVSSLVRAYTNIANELTEAGYSEREQKEIKEKVRHYAAIRDELKLM
SGDYLDLKVFDPAMRYLIDSYIQAEESRTLASFEETSLLEIIALNGLQKALETLPSAIGK
NKEALAETIENNIRKLIVDKRDINPAYYDKMSKILKELVEKRKKEVISYEEYLKEVEKLT
KMLINREFNEEPYPPSIRSSMAKKAIYDNLEGIENREKLTNAIDEAVRKTKKDDWRGHKI
KERQVRNAIKKILEDEGLEELTEKIFQIVLKQGEY
NT seq 3168 nt   +upstreamnt  +downstreamnt
atgagcatcggcgtaaacgaattagagaaaaagactcaggagagagttataaacttcttt
gttgaggttcttggttatgattatcttgggaactgggagaagagggaaggaaactcaaat
attgagaaggaatatcttatcaattttctaagaaagcagggatacaatgatgaagttata
aaaaaagcaattgaaaagctgaagaaaatatccgagaaccagcaaaaattgctctatgat
agaaataaagaaatttacgaacttttaagatatggaacagatgtaaaaattcatccttcc
gagccatccatacatgtcaatttcatagattgggagaatccagagaataatcattttaca
atagccgaggaggtaacaataaggggaagacataccaagagacctgacatagttctatat
ctaaacgggatcgccatcggagttttggaactgaaaaggtcaagtatttccataagcgag
ggaatacggcagaaccttgacaaccagaagaaggagttcattcaagatttcttcaccacc
gtacagttaatcatagctggaaacgatacgcagggtttaagatatggaacgatagaaaca
ccggaaaggtactatcttgaatggaaagaggagaatccggagtatgatcataacaaaaaa
acaaccatacccagagcactaccgagggataaatgcgaagtatccgataatatccttgac
tgcgatatttacaggcttttaaataaaaataggctcttggaaattatacacgattttata
atttttgatgctggtatcaaaaaggttccaagacacaaccagtattttgctgtaaaggca
gcccagaaaagcataaaaaagagagaaggtggcataatttggcatactcaaggaagcggg
aaatcgctcataatggtgtggcttgcaaaatggattatagagaatatttcagacagtaga
gttttgattgttaccgatagaatagagttagacgagcagattgaaaaagtattcaagggt
gtaggggaaaatatatatagaacaaaatcagcaagggatttaattgaacaactaaacaga
aaagatgagaatcttatgtgttcattaatacataaattcggaaaagcagaggcaacggac
aaggattatgatgaatatatccatgaactaaaggtaacactcccacgtgattttaagcct
aagggtaacatatttgtttttgtggatgaatgccatagaactcaatcaggtaagctacat
aaagccatgaaagaaattttacccaatgctgtttttattggatttacaggaacgccactc
ctcaaaaaagataaacctacaaccttggaaacatttggtaagtatatccatacatacaag
tttgatgaaggtgtccaagacggtgtaatccttgatttgaggtatgaagcgagggatgtg
gatatcaaagtcgtgtcagaggataaaatagataagtggtttgaagtaaaaacaaaaggc
ttgtcagatattgccaaggctcaacttaaagagagatgggggacattgaagaaactttac
agttcgagaagtaggatggagaagatcgttgcggacataatcttcgattttgaaacaaaa
ccaagattggcaactggcaggggcaacgccatgcttgtggcaggtagcatatacgaagcg
tgtaagtactatgaactttttaagtcgagaggatttgacaaagttgccattgtaacatcc
tatcgtccaagtattgtgagcataaaaggggaagagaccggagaggaaggagaggcggaa
aacataaagaagtacgaaatttacaaaaagatgatagccgattattataacatctctgaa
gaagaagcagtaaaagattaccggatagagaaatttgagaaggatgttaaaaagaaattt
attgaagagcccggacagatgaaattgttaatcgtggtagataaacttttaacaggattc
gatgcgccaagcgctacttatctttacatagacaagcccatgagggaccatggcttattt
caggcaatctgtagggtaaacaggttggataataaagacaaaggagatgagttggacaag
gattatggttacattgtggattatagggatctattcaacagtatggaaaaagccattaaa
gattacacatcaggagcattcgcagagtttgataaggaagatgttgaaggattgttaaag
gatagattaaccgatgcgaaaaagagacttgacgaagttcttgagaaagttgaactattg
gtggagggcgtaaagccaccaaagggcataaatgagtatagggaatattttgttggagat
aactctgaggaaaagcaacagctcaggttagaattttacaagcgagtatcttcccttgtg
agagcttacacgaatatagctaacgaattaaccgaagcaggatattccgagagggaacaa
aaagaaatcaaggaaaaagtcaggcattacgcagcaataagagacgagctaaaactgatg
agcggcgattacttagatttaaaggtgtttgatcctgcaatgaggtatcttatagactct
tacatccaagcggaggaaagcagaacattagcatcgttcgaagaaacatcattgctggaa
ataatagcacttaatggtcttcagaaggctttagaaacattaccaagtgccatcggaaag
aacaaggaagcacttgctgaaacaatagagaacaatataaggaagttgatagtagacaag
agagatattaatccggcttattacgacaaaatgtccaaaatacttaaggaactggtagaa
aaaaggaaaaaagaagttatcagttacgaggagtacctaaaggaagttgaaaaattaacc
aagatgctcataaatagggaatttaatgaagaaccttaccccccaagcataagaagcagt
atggcgaaaaaggctatttatgacaacttagaaggcattgaaaatagagagaaacttaca
aatgctattgatgaagctgtaagaaaaaccaaaaaagatgactggagagggcataagata
aaagagcgacaggtaagaaatgccattaagaaaatcctagaagatgagggtctcgaggaa
ctcactgaaaaaatctttcagatagtgttaaaacagggtgagtattaa

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