Thermosipho melanesiensis: Tmel_0419
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Entry
Tmel_0419 CDS
T00550
Name
(GenBank) UvrD/REP helicase
Organism
tme
Thermosipho melanesiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PDDEXK_1
Cas_Cas4
ResIII
OEP
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABR30287
UniProt:
A6LK36
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All DBs
Position
441771..444782
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AA seq
1003 aa
AA seq
DB search
MGIIEKIKDINKNYFISASAGTGKTYTITHFYVKILSEYEKQNYPEIIDRIVVTTFTKKA
AAEMKERIFKLVEPHNSPYWHKVKNYLPRAIISTIDSFCQRLLREENINANIDPNFTIIS
DLKMSKLIDRAVFLTLKLTFQLYDFGKTNVRLNISKHRKENIEKLLEKLKDVKEGIKELF
NIYKSINEIEKILQETLKNWRTEMKRSTVSEKILENGESKSLALQAFKYMVLISKEIYEG
FTIDNFEFDFKGVLEKTLDVLEDENIRKKYQERFKYIIIDEFQDTNYLQKELFDKLHTSK
NYLFYVGDRKQSIYRFRNSDVSVFLKTQKDFEKNNEEVLALKENYRSNSALVEYFNFISK
NKIFNKQLVTGVEKYETFKTLEPDIYEKLWFDEKMDLSISTISCEGNIPSLNDNEKGGRI
KYIIVEEETKNLLEKEAEIAAFIVKKLVGKKITVKGQNGTCIDKEITYGDFAILRSRLKD
AEDVYKSIFEKYGIPLHVIGGKSFYKQLEILAILNALFAVQNPNNNYFFTRYFFSPLVLG
TFKEYDEIVKNRREDETLFETAKRIKFKSERDNAIKILEKYAQLKYYIRPTEILKGLIND
LNYLEKLAFFEDRESAILNVKKLLLEAQEFDQLADSFLELVKLIQKIGDTQEAEASIEDE
SSESVKLMTIHASKGLEFKIVILGDLYDKQKENSNHLRFYNKKGTSYFMLTKIMNEFPFD
IVKEFYLDEIYNETELSRKMYVAITRASEMFIPIIFSRDFSNTLASYIMLEEKELEKLKE
KVKSFELIKLKDVKLYAEKHENKRKKETIPLENLTDFSHLSYKSYISPTTLYGFLGNEKE
AQEEDITFALSDKTFQGSQIHKKLSNINTLSQLKYLENTDILPVKISTKIGFLFENSKVY
SEWRLVKPFYHEGRKYMLFGIPDKVIFKDEKIYVIDFKNVENLKDEKYKFQIQFYMYLLH
DFGKVHKGYILSTKTGDILMVKYENNFEELIHKAIEIFEKVKL
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggggataattgaaaagataaaagatataaataaaaactattttatctctgcatcagct
gggacaggcaaaacatataccataacacatttttatgtaaaaatactcagtgaatacgaa
aagcaaaactatccagaaataatagatagaatagttgtaaccacctttacaaaaaaagcg
gctgctgaaatgaaagaaagaatttttaaacttgttgaacctcacaattcaccatattgg
cacaaagtaaaaaattatcttccaagagcaattatttcaacaattgacagcttttgtcaa
agattacttagagaagaaaatattaatgcaaatatcgatccaaattttacaataataagc
gatttaaaaatgtcaaaattgatagatagagctgtatttttaacgttgaagttgacattt
caactatacgactttggaaaaacaaatgtaagattaaatatatcaaaacatcgcaaagaa
aatatagaaaaacttttggaaaaattaaaagatgtaaaagaggggattaaagagttgttt
aatatatacaaaagtataaatgaaatagaaaaaatactacaagaaaccttgaaaaattgg
agaactgaaatgaaaaggtctacagtctctgaaaaaatattggaaaatggtgaaagtaaa
tcccttgcactacaagcattcaaatacatggtactaatatcaaaagaaatatatgaagga
tttacaattgataatttcgagtttgattttaaaggggttctagaaaaaactttagatgtt
ttggaagatgaaaacataagaaaaaagtaccaggaaagatttaaatatataataatcgac
gaatttcaagacacaaattatcttcaaaaagaattatttgacaaactacataccagtaaa
aattatctattttatgttggagacagaaaacaatccatatatagatttagaaactcagat
gtttccgtttttttaaaaactcaaaaagatttcgaaaaaaacaacgaagaagtattggct
ttaaaagaaaactacagatcaaatagtgctctcgtagaatattttaatttcatatctaaa
aacaaaatattcaacaaacaattagtaactggtgttgaaaaatatgaaacctttaaaact
cttgaacctgatatctacgaaaaactatggtttgatgaaaaaatggacttatcaatttcc
acaatttcctgtgaaggaaatattccatcattaaatgacaacgaaaagggaggtaggatt
aaatatatcattgttgaagaagaaacaaaaaatctattggaaaaagaagcagaaatagct
gcatttattgtcaaaaaactagtcggcaaaaaaatcacggtaaaaggacaaaacggaaca
tgcatcgacaaagaaataacatatggtgattttgcaatattaagatccagattaaaagat
gcagaagatgtttacaaatctatttttgaaaaatacggtataccactacatgtaattggc
ggaaaaagcttttacaagcaacttgaaatactagcaatcttaaatgccttatttgcagtt
caaaatccaaacaacaactatttttttacaagatactttttttctcctcttgtactagga
acttttaaagaatacgatgaaattgtaaaaaatcgaagagaagatgaaacactttttgaa
acggctaagagaataaagtttaaaagtgaaagagataacgcaataaaaatcctcgaaaaa
tacgcacaacttaaatactacattaggccaactgagatcttaaaaggattaataaatgat
ttaaattatcttgaaaaacttgcattttttgaagatagagaatcggctatactaaacgta
aaaaaattacttttagaagcacaagaattcgatcaacttgcagattcatttttagaactt
gtaaaacttatacaaaaaataggtgatactcaagaagcagaagcatctatagaagatgaa
tcttctgaaagcgttaagttaatgacaatacatgcatctaagggcctagaatttaaaatt
gtaatattgggggatttatacgataaacaaaaggagaactcaaatcatttgagattttac
aacaaaaaaggaacaagctatttcatgttaactaagataatgaatgaatttccctttgat
atagttaaagaattttacctcgatgagatatacaatgaaacagaactttcaagaaaaatg
tacgttgcaataacaagggcttctgaaatgtttattcctataattttttcaagggatttt
tcaaatacacttgcaagttatataatgttagaagaaaaggaattggaaaaattaaaggaa
aaagtaaaaagttttgaacttataaaattaaaagatgtaaagttatatgcagaaaaacat
gaaaataaaagaaaaaaagaaaccattccgttagaaaatttaactgatttttcacatctt
tcatacaaatcttatatttctccaactaccctttatggctttttaggcaacgaaaaagaa
gcacaagaagaagatataacctttgcactttctgataaaacctttcaaggttctcaaatt
cacaaaaagctttcaaacataaacactttatcacagttaaaataccttgaaaatacggac
attttacccgttaaaatctccactaaaatagggtttttatttgaaaattcaaaagtatat
tcggaatggaggcttgtaaaaccattttatcatgagggtagaaaatatatgctatttggt
attcctgataaagttatctttaaagatgaaaaaatttacgttattgattttaaaaatgtg
gaaaatttaaaagatgaaaaatacaagtttcaaatacaattttacatgtaccttttacat
gactttggcaaagtacataagggttatattttatcaacaaagaccggtgatattttaatg
gtaaaatacgaaaataacttcgaagaactcatacataaagcaattgaaattttcgagaag
gtgaaattatga
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