Thermosipho melanesiensis: Tmel_0867
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Entry
Tmel_0867 CDS
T00550
Name
(GenBank) RNA-binding S4 domain protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
tme
Thermosipho melanesiensis
Brite
KEGG Orthology (KO) [BR:
tme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tme03009
]
Tmel_0867
Enzymes [BR:
tme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Tmel_0867
Ribosome biogenesis [BR:
tme03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Tmel_0867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ABR30728
UniProt:
A6LLC7
LinkDB
All DBs
Position
complement(902864..903556)
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AA seq
230 aa
AA seq
DB search
MRLDKFLSNAKVGSRKEVKRLIKFGIVKINGEIITNVDFKVKENDIVTVNNTPITPYHNV
YIIFNKPTGYTSSKSEFERNIFEFIDHPYVENLHIAGRLDKDVEGLLLITNDGIFTHKIT
SPKSKIEKEYIVKVDKEISDEMIQKAKDGIVLKNGTRFKPAIIKRLKDNFISITITEGKY
HEIKLIVKFLGLSYKKIERIRIGKLKLEDFNLKRGEWSEIDYKTALKALE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgactagataaattcctatcaaatgcaaaggtgggttctagaaaagaagttaaaagg
cttataaagtttgggattgtaaagatcaatggagaaataataacaaatgtggattttaaa
gtaaaagaaaatgatattgtaacagtaaataacacacccattaccccctatcataacgtt
tatataatttttaacaaacctacaggatatacttctagtaaatctgaatttgaaagaaat
atatttgaatttattgaccatccttacgtcgaaaatctccatattgcaggaagactagat
aaagatgtggaggggttgttattaattacaaacgatggaatatttacacataaaataacc
tccccaaaaagcaaaatagaaaaagaatacatagtaaaagttgacaaagaaatatcagat
gaaatgatacaaaaagcaaaagatggtatagttttaaaaaatggaacacgctttaaacct
gctataataaagagattaaaagacaactttatctccataacaattacggaaggaaaatat
catgagataaaattaatagttaaattccttggcctttcctacaaaaaaatcgaaagaata
cgcataggtaaattaaaactcgaagatttcaatttaaagagaggtgaatggtcggaaatt
gattataaaacagccttaaaagcccttgaatag
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