Thermosipho melanesiensis: Tmel_1001
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Entry
Tmel_1001 CDS
T00550
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tme
Thermosipho melanesiensis
Pathway
tme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Tmel_1001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tme03400
]
Tmel_1001
DNA repair and recombination proteins [BR:
tme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Tmel_1001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
DUF1184
nSTAND_NTPase5
AAA_14
AAA_29
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
ABR30862
UniProt:
A6LLR1
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Position
1021611..1024070
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AA seq
819 aa
AA seq
DB search
MGNLEKLTPMMKQYMGIKEKYKDAILLFRLGDFYEAFFEDAEIISKVLNIVLTKRQNAPM
AGIPYHALDNYLKKLVESGYKVAICEQMEDASQAKGIVKREVTRVITPGTIIEDELLSND
NNYLMAVIFDEKYVSAFIDVSTGELFLKSFDTFLEFVDFVKISSISQVICSKELFDKLKE
EIPHLFVEELDEWYFQGYEEKIKETYGLFSIEHLEITELEKKVLGALFKYLEYTLMENKP
PQKPKRLEGSKYMILDSKTVENLSLIPGEKGKNLFDILNKTKTSMGARLLKKWILQPLKE
KKEILERQKLVEAFYNDHLLLNEVREYLSGVYDLERILTRLGYGKVSPKDLVSLKRSLYL
VPSIKDALRTNENLVSFAQSLNEFNEVVGILEKALYDEPSNAPGDGNVIKGGYSVELDDY
RNLLFHSEEKLKEFQESEREKTGIQKLRVGFNQVFGYYIEVPKGQVKNVPDYYIRKQTLV
NSERYITQELKEFEEKIMSAREKVELIEKSLFEELKQKLSEYIDGLRNLAQKLSELDAIS
NLAMVARLYGYTKPKFTGGEFYVKNARHAVVERYVSDFVANDIYMDDRRRMYIVTGPNMS
GKSTYIRQVGLIAVMAQIGSFVPADDAEIPIFDRVFTRMGARDDISTGKSTFLIEMSEVA
LILEKATKKSLVLLDEVGRGTSTFDGISIAWAMSEYIYNEIGCETMFATHFTELTELSDV
YEGIKNLTIEVRETNNGVVFLHKVVEGIADRSYGIEVAQIAGVPDGVVERAKEILDIISQ
KSELEKKVRVLKEGQLKKIKSKKKIPEGQLSLFEVGDIE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatttggaaaaattaactccaatgatgaagcaatatatggggataaaggaaaaa
tataaagatgcaatacttttatttagacttggtgatttttacgaagcattttttgaggat
gcggaaataatctcaaaagtgttgaatattgttttaacaaaaaggcaaaatgcccccatg
gcggggataccgtaccatgcattagataattatttaaaaaaacttgttgaaagtgggtat
aaggttgcgatatgtgaacaaatggaagatgcatctcaggcaaagggaatagtgaaaaga
gaagtgacaagggtaataactcctggtactattattgaagatgaacttctttcaaatgat
aataattatttaatggcggtaatatttgatgaaaaatatgtttctgcctttatagatgtt
tcaactggtgaattgtttttgaaatcttttgatacctttttagagtttgttgattttgtg
aaaatttcaagtatatcgcaagtaatttgtagtaaagagttgtttgataaattaaaagaa
gaaatacctcacctttttgttgaagaactggatgaatggtattttcaaggctatgaagaa
aagataaaagaaacatacgggcttttttccattgaacatctcgaaataactgaacttgaa
aaaaaggtattaggtgctttgtttaagtaccttgaatacactttgatggaaaataaacca
ccacaaaaacctaaaagattagaaggttcaaagtatatgattttagattcaaaaaccgtt
gaaaatttatctcttattcctggagaaaaaggtaagaatttatttgatatacttaataaa
acaaagacgtctatgggagcaaggcttttaaaaaagtggattttgcaacctttaaaagaa
aaaaaagagatattggaaaggcaaaagttggtagaagcgttttataacgatcatcttctt
ttaaatgaagtaagggaatacttaagtggtgtttatgacttagagaggattttaactaga
ttaggttatggaaaagtttcacctaaagatcttgtttccctgaagagaagcctgtatttg
gttccaagtataaaagatgctttgagaactaatgaaaatctagtgagttttgcacagagt
ttgaatgaatttaatgaagttgtaggtattttggaaaaagccttgtatgatgagccatca
aatgctccaggagacggtaatgtaataaaaggtgggtattctgttgaattagatgattat
cgtaatttgttatttcattctgaggaaaaactcaaggagtttcaagaaagtgaacgggaa
aagactggtattcaaaaattaagggtaggttttaatcaagtctttgggtattatattgaa
gtaccaaaaggtcaggtgaaaaatgttccagattattacattagaaagcaaacgcttgtg
aattcagaaaggtatataacgcaagaattgaaggaatttgaggaaaaaataatgtctgct
cgtgaaaaggtagaattgatagaaaaaagtttatttgaagaattgaaacagaaactttct
gagtatatagatggtttaagaaatttagcacagaagttatctgagctagatgctatttcg
aaccttgctatggttgctagattgtatggatatacaaaacccaaatttacaggtggagag
ttttatgtgaaaaatgctaggcatgctgttgttgagcggtatgtttcagattttgtggca
aatgatatatacatggatgatagaaggagaatgtatatagttacaggtcctaatatgagt
gggaagagtacgtacattagacaggtaggtttaatagccgttatggcacaaattggttct
tttgtaccggcggatgatgcagaaattcccatttttgatagggtattcacacgaatggga
gcccgtgatgatatttcaactggtaagagtacttttttaatagaaatgagtgaagtagct
ttgatacttgaaaaagctacgaaaaaaagtttggtgttattggatgaggttggtagagga
acaagtacatttgatggaataagtattgcttgggctatgagtgaatatatatacaatgaa
ataggatgtgaaactatgtttgcaactcactttacggagcttacagaactttcagatgtt
tatgaaggaattaaaaatttaacaatagaggtaagggagacaaacaatggtgtggtgttt
ttgcataaggttgttgaaggaatcgcagatagaagttatggtatagaggttgctcaaata
gctggtgttcctgatggagttgtagaacgtgcaaaagagattttagatataatttctcaa
aagagtgaacttgagaaaaaagtaagggttttaaaggaaggacaacttaagaagataaag
agtaagaaaaaaataccagaaggacaactttcacttttcgaggtgggtgacatagaatga
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