Thermosipho melanesiensis: Tmel_1024
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Entry
Tmel_1024 CDS
T00550
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tme
Thermosipho melanesiensis
Brite
KEGG Orthology (KO) [BR:
tme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tme03032
]
Tmel_1024
03400 DNA repair and recombination proteins [BR:
tme03400
]
Tmel_1024
Enzymes [BR:
tme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tmel_1024
DNA replication proteins [BR:
tme03032
]
Prokaryotic type
DNA Topoisomerases
Tmel_1024
DNA repair and recombination proteins [BR:
tme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tmel_1024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
DNA_ligase_ZBD
HypA
Zn_ribbon_RPB9
Auto_anti-p27
Zn_ribbon_recom
Lar_restr_allev
Toprim_4
RUBY_RBDX
DUF7351
QueF
Rad50_zn_hook
DUF1272
Motif
Other DBs
NCBI-ProteinID:
ABR30885
UniProt:
A6LLT4
LinkDB
All DBs
Position
complement(1051259..1053349)
Genome browser
AA seq
696 aa
AA seq
DB search
MEKKKKVIIVESPAKAKTIEKILGKNFKVISSKGHVRDLPPKKFGVDLKTFEPEFEIIPG
KEKVIEKIKKETEGKEVLIASDMDREGEAIAWHLSNILNLSGKNRIIFTEITPNTIKKSV
ENPREIDIKKVNAQLARRILDRIVGYKISPLLWKIIKGAMSAGRVQSAALKIICDRERKR
FLFKPKEFYKVSIEIKKVKANLWGISGKKIKQENITEEIANDIKETVKEVILEKISEKER
KKSSPLPYITSTLQQDAATKLGFPVSKTMQIAQALYEGVDTKEGHIAFITYMRTDSTRVS
EEAKEMAKAFIEKKFGENYLGTTKKGKKKKKNVQDAHECIRPVNVEITPEIAQDLLNKDM
YKLYKIIWKRFVASQMKEATYKDKTYIFKSGKYEFRTTISHRIFDGFEIIYPEKETTEKA
VQLNEGEKYKVSKINVEKDATKPPSRFTEATLVKTLEAEGIGRPSTYATIISTLLQRKYV
VKEKKELVPTLLGFVVEDFLTKKFPEIVDKKFTALMEEELDKIEEGEKKWKEVLNEFYSK
FSKDLLNAQKEFYTINYETDLKCEECENTYKLKIGKYGLYLNCESCGKNKSIDNTLNAVI
IKNNAYIQKAIEKNIKETVSENSCPKCGGHLTRKKGKFGYYFKCDNCDFTVSGYKIAAGR
CPKCSSVVVMKRSKNNKIYWACSNPDCDYMSWNEPK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagaaaaagaaagtaataattgttgaatctccggcaaaggcaaaaactatagaa
aagatattggggaaaaattttaaagttatatcatccaaaggacacgttagggatcttcca
ccaaaaaaatttggagtggaccttaaaacttttgagcccgaatttgagataattcccggg
aaagaaaaggtaattgaaaaaataaagaaagaaacagagggaaaagaagtacttatagct
tcagatatggatagagaaggagaagctattgcctggcatttgtcaaatatcttaaatcta
tctggaaaaaaccgtataattttcactgaaatcactccaaataccattaaaaaatccgta
gaaaatccaagagagattgatataaaaaaggtaaatgctcagcttgcaagaaggatactc
gacagaatagttggatacaaaataagtccccttctttggaaaataattaaaggtgcaatg
agtgcaggaagggttcaatcagcggcactaaaaatcatatgtgatagagaaagaaaaaga
ttcttatttaaaccaaaggaattctacaaagtttctatagaaataaaaaaggtgaaagca
aacctttggggaatttctggaaaaaagataaaacaagaaaacataactgaagaaatagca
aatgacattaaagaaacggtaaaagaagtaatacttgaaaaaatttcagaaaaagaaaga
aaaaaatcttcacctttaccatacataaccagtacattacaacaagacgctgcaacaaaa
ctggggtttcccgtttcaaaaacaatgcaaattgcacaggcgttgtacgaaggtgtggat
acaaaagaaggtcatatcgcctttataacctatatgaggactgattcaactcgcgtttca
gaagaagcaaaagaaatggcaaaagcatttatagaaaaaaaatttggagaaaattatctt
ggtacaaccaaaaaaggaaagaaaaaaaagaaaaacgtacaagatgcccatgaatgtata
cgacctgtaaatgttgaaataacacctgagattgcacaagatctgctcaataaagatatg
tacaaattatacaaaatcatatggaaaaggttcgttgcctcacaaatgaaagaggctacc
tacaaagacaaaacctatatattcaaaagtggaaaatacgaatttagaacaacaatttcg
cataggatatttgatggttttgaaataatttaccctgaaaaagaaactacagaaaaagct
gtacagcttaatgaaggagaaaaatacaaagtttcaaaaataaatgtagagaaagacgct
acaaaaccaccttcaagatttaccgaagcaacacttgtaaaaacactagaagcagaagga
atcggaagaccaagcacttatgcgaccataatttctactttactccaaagaaaatatgtt
gtaaaagaaaaaaaagaactcgttcccacactccttggttttgtggtagaagacttttta
acaaaaaaatttccagaaatagtagacaaaaaatttacagcactaatggaagaggaattg
gacaaaatagaagaaggagaaaaaaagtggaaagaagtcttaaatgaattttactctaaa
ttttcaaaagacttattaaatgcacaaaaggaattctatacaataaactatgaaacagat
ttaaaatgcgaagaatgtgaaaatacatataaattaaaaataggaaaatatggattgtac
ttaaactgcgaatcttgtgggaaaaacaaaagcatcgataacacattaaatgcagttata
atcaaaaacaatgcatacatacaaaaagctattgaaaaaaatataaaagaaacagtttct
gaaaattcatgtccaaaatgtggcggacatttaacaagaaaaaaaggaaaatttggatat
tactttaaatgtgacaattgtgattttacagtttccggatataaaattgcggcggggaga
tgccccaaatgtagttctgtagttgttatgaaaagaagtaaaaacaacaaaatatattgg
gcatgttcaaatccagattgtgattatatgtcatggaatgaaccaaaatga
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