Thermosipho melanesiensis: Tmel_1025
Help
Entry
Tmel_1025 CDS
T00550
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tme
Thermosipho melanesiensis
Brite
KEGG Orthology (KO) [BR:
tme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tme03019
]
Tmel_1025
Messenger RNA biogenesis [BR:
tme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tmel_1025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Cas3_HD
GNAT_acetyltran
Motif
Other DBs
NCBI-ProteinID:
ABR30886
UniProt:
A6LLT5
LinkDB
All DBs
Position
complement(1053351..1054361)
Genome browser
AA seq
336 aa
AA seq
DB search
MKLPKELIEKFKEPFISELENYINSEVELIVKVKSKRLLENKNGQKYLLITFEDKTGILR
AIDWFNAEKNDSKIDVGNVVRANGKVVLYDGRLQLNILQDSDIIVLNNNEYSYERFVAES
KIPIDVIMKDLNNMIKSIKNYHLKKLLEEIFNDKELSEKFKEAPAGLKIHHNYRGGLAEH
SITVAKMCDNLSKVYPWINRDLLITGALLHDIGKIYDYVINPKGIEITKSGELIGHIVKG
YEIVEKKIESIGLNEELKTELLHMIISHHGELEWGSPIVPKTPEAFILHMIENLDSKLNR
IQNIKEKELETNPDKEWSDFDPNLGRRFLLKHIERG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattacctaaagaattaattgaaaaatttaaagaaccgtttatttcagagctagaa
aattacattaactccgaagtagaattaatagtaaaagttaaaagcaaaagactgctcgaa
aataaaaatggtcaaaaatacctacttatcacatttgaagacaaaacaggcatattaaga
gctattgattggtttaacgcagaaaaaaacgattcaaaaatagatgttggaaatgttgtt
agggcaaatgggaaagtagtactttatgacggaagattgcaactaaatatactccaagac
tcggatattatagtcttaaacaacaacgaatattcttatgaaagattcgtggccgaatca
aaaattccaatagatgtaataatgaaagatctaaataacatgataaaatcgattaaaaac
tatcatcttaaaaaactattggaagaaatatttaacgataaagagctttctgaaaagttt
aaagaagcacctgcaggtttaaaaattcatcacaattataggggaggacttgcagaacat
agcattactgttgcaaagatgtgtgataacctttcaaaggtttatccttggataaatcgt
gatcttttaattacaggagcgctattacacgatattggaaaaatatacgattatgttatt
aacccaaaagggattgaaataactaaatccggtgaattaataggccatattgtaaaaggt
tatgaaattgtagagaaaaaaatagaaagtataggccttaatgaagaattaaagaccgag
cttctccatatgataatttctcatcatggagaactggaatggggttctcccatagttcca
aaaactcctgaagcgtttattttgcacatgatagaaaatctagattcaaagttaaataga
atacaaaatataaaagaaaaagagctagaaacaaatccagataaagagtggagtgatttt
gatccaaatcttggaagacgctttttattaaaacacattgagaggggataa
DBGET
integrated database retrieval system
