Thermosipho melanesiensis: Tmel_1431
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Entry
Tmel_1431 CDS
T00550
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
tme
Thermosipho melanesiensis
Pathway
tme02020
Two-component system
tme02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tme00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Tmel_1431
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tmel_1431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tme03021
]
Tmel_1431
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tme02035
]
Tmel_1431
Transcription machinery [BR:
tme03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tmel_1431
Bacterial motility proteins [BR:
tme02035
]
Flagellar system
Flagellar assembly proteins
Stator
Tmel_1431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Mx_ML
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ABR31278
UniProt:
A6LMX7
LinkDB
All DBs
Position
complement(1429618..1430298)
Genome browser
AA seq
226 aa
AA seq
DB search
MIDKEKIIQEYLPYIKRIAYDLKKNLPHNIEIDDLIQEGLIGLLQAIERYNPKKGAKLRS
YILTRVKGAMYDYLRKIDWMPKNLRHDVKVVEDAISKMENSGKIIDFNEISKITNLPLEN
VKRAYNEMVRKQFLMLDDYLTEDLEINETISSSDYTPEETAFKEIIKEELKKAINKLDEK
EKIILNLRFEHELSLKEIGKILNLTESRVSQILSSIILKLKKMLGG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacaaagaaaaaattatacaagaatatctaccttatataaaaagaattgcgtat
gatttaaagaaaaatctaccacataatattgaaattgatgacttaatacaagaaggtctt
attggattattacaagcaatagaacgttataaccccaaaaaaggagcaaagctaagatcg
tatattttaaccagagtaaaaggtgcgatgtacgactatcttagaaagatagactggatg
ccaaaaaacctaaggcacgatgtaaaagtagttgaagatgctatctccaagatggaaaat
tcgggaaaaataatagattttaatgaaatttcaaaaataactaatctcccacttgaaaat
gtcaaaagagcatataacgaaatggtaagaaagcaatttctaatgcttgatgattaccta
acagaagatctagaaattaatgaaacaatttcttcttctgattataccccagaagaaacg
gcatttaaagaaatcataaaggaagaattaaaaaaggcgataaataaattggatgaaaag
gaaaaaataatactaaatttaagatttgaacatgaattatctttaaaagaaattggaaag
atattaaacttaacggaatcaagagtttcccaaattctaagctcaattattttaaaacta
aaaaaaatgttggggggataa
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