Thermosipho melanesiensis: Tmel_1524
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Entry
Tmel_1524 CDS
T00550
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tme
Thermosipho melanesiensis
Pathway
tme03030
DNA replication
tme03430
Mismatch repair
tme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tmel_1524
03430 Mismatch repair
Tmel_1524
03440 Homologous recombination
Tmel_1524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tme03032
]
Tmel_1524
03400 DNA repair and recombination proteins [BR:
tme03400
]
Tmel_1524
Enzymes [BR:
tme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tmel_1524
DNA replication proteins [BR:
tme03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tmel_1524
DNA repair and recombination proteins [BR:
tme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tmel_1524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
ABR31369
UniProt:
A6LN68
LinkDB
All DBs
Position
complement(1511124..1513595)
Genome browser
AA seq
823 aa
AA seq
DB search
MITAIVSPYSFKGSILKLEEVVKFAHKQGVNSLLLCDTNFHATVKFIEECQKYKITPIIS
YLYNDKIYYAKNTEELYELFNAYNTNNFSSLKLNYIDKDDVYLAYYFPGKRRIYELFCNV
LGVKCVEKGVLKNIYCNLEAYGYKLKSFQTLPTAPKNFIDVNKIKNNVYKERLIRELEII
KEKNFLDYFHTVYKITKIAKEHDIAIGPGRGSAVGSLLSYMLGITKIDPIKHNLLFERFL
NKGRKEPPDIDLDVEDEKRKELIELLKKEFKYVYYISTFSNIGPKTIKKIANEYKISTSE
LSDLLGLPTHKSVHAAGIIISKTPIKVPIKEDVIEWDMDSLNKIGYIKFDILGLKTLTIM
NKLEKKIGKPKLDKITFNFISKGYTNGIFQLESNISKRIIRAIKPSSIDELSIVISLNRP
GPLKAKLDRELAIAKWKQRKKSFELLNDTFGIIVFQEQIMLIAKKYANFSNEEADVLRKG
IAKKEKKLVEPLIKKLKKNILNILSENETNELIKIILEFSEYAFNKSHAIAYSYISYSLA
YFKKHFPKDFYSTLLKYDTTKIEKIIFEMQSRGFKILPPNINGNPENKKEFHIPLTLVKG
INEKIEKEIIANAPYNSLKGFFEKNPNINFSIVESLIKIGSFDYLSESRRKLLMKLKEIR
SGVNEKILELSSSLFGKNFSNEIKIEKLWERCDMEYNTLGFCISKPFDEFKNLLSPLSVA
LSREQKLAINVKAVGGYVSDGVTTIKLNVPDGVYTIINDKEIKIFPGIKKAIYVIDQLPS
KLFIEKGNENEFVEIVDKKLKIKSARPVFDDYKILIEGESDVC
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagctattgtatccccgtactcttttaaaggttctatattaaaattagaagaa
gtggtaaagttcgcacataaacaaggtgtaaattctttgttgttatgtgatacaaatttt
cacgcaacagtaaaatttattgaagaatgtcaaaaatataaaattactcctataatatcg
tacctttataacgacaaaatatactatgcaaaaaacacggaagagttatacgaacttttc
aatgcttataacacgaataatttttcctcactaaaacttaattacatagataaagacgat
gtataccttgcatattactttccaggaaaacgaagaatctacgagctattctgtaatgtc
ttgggtgtaaaatgcgtagagaaaggtgtgttaaaaaacatttactgtaatttagaggcc
tatggttacaagctaaaatcctttcaaacccttccaaccgctccaaaaaattttatagat
gtaaataaaataaaaaacaacgtatataaagaaaggctaatacgtgaattagaaataata
aaggaaaaaaacttcttagattactttcatacagtatataaaataacaaaaattgccaaa
gaacatgatatagcaattggtccgggacgtggaagtgcggtagggtcactactttcatat
atgttaggaataactaaaattgacccaataaaacacaatttgctattcgaaagattctta
aacaaaggtcgaaaagaaccaccagacatagatctagatgttgaagatgaaaaaagaaaa
gagttaatagaattactaaaaaaagaatttaaatatgtctactacataagtactttttca
aacattggtccaaaaacaattaaaaaaatcgcaaatgaatacaaaatttccacatctgaa
ctaagtgaccttttaggactccccactcacaaaagcgttcatgcagctggaataattatt
tcgaaaactcctatcaaagtgcccattaaagaagatgtaatagaatgggacatggattcc
ttaaacaaaattggatatataaaatttgacatcttaggtcttaaaacattaaccataatg
aataaacttgaaaaaaaaattggaaaaccaaaacttgacaaaatcacttttaacttcata
tcaaaaggatatacaaatggtatattccaacttgaaagtaatatatcaaaaagaataatc
agagcaataaaaccaagttcaatagatgaactctccattgtaatttcattaaatagacct
ggccctctcaaagcaaaattagatagggaattagccattgcaaaatggaaacagagaaaa
aaaagctttgaacttctaaatgacacttttggaataatagtctttcaagagcaaataatg
ttaatagctaaaaaatacgcaaacttttcaaatgaagaggcagatgtattaagaaaaggt
atagctaaaaaagaaaaaaaattggtagaacctctaataaaaaagttgaaaaaaaacatt
ttaaacatactatcggaaaatgaaacaaatgaattaataaagataatattagaattttca
gaatatgcttttaacaaatcacacgcaattgcatattcatatatttcttactcattagca
tatttcaaaaaacactttcctaaggatttttactcaacccttttaaagtacgatacaaca
aaaattgaaaaaataattttcgaaatgcaatcaagaggttttaaaatattaccaccaaat
attaatggaaatccggaaaacaaaaaagaatttcacataccgctaacacttgtaaaagga
ataaacgaaaaaattgaaaaggaaataatagcaaatgccccatataattctttaaaaggt
ttttttgaaaaaaacccaaatataaacttttctatagtagaatctttgataaaaatagga
agttttgattatttatcagaaagtagaagaaaattgttaatgaaattaaaagaaattagg
agtggagtaaacgaaaaaattcttgaactttccagtagcttatttggaaaaaatttttca
aatgaaataaaaatagaaaaactatgggaaagatgtgatatggaatataacacattaggt
ttttgtatttcaaagccctttgatgaatttaaaaaccttttatcaccactttcagtagca
ctatcccgtgagcaaaaattagccattaacgtaaaagcagttggcggttatgtaagtgat
ggagttacaacaataaaactaaatgtaccagacggtgtttacacaatcattaatgataaa
gagataaaaatatttcccggaataaaaaaagcaatatatgtaattgaccaactcccatca
aaacttttcatagaaaaaggtaatgaaaatgaatttgttgaaatagtcgataaaaagtta
aaaataaaaagtgcaagacccgtttttgatgattacaaaatactaatagagggtgaaagt
gatgtatgttaa
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