Treponema medium: DWB79_00250
Help
Entry
DWB79_00250 CDS
T07695
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tmed
Treponema medium
Pathway
tmed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB79_00250 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmed03019
]
DWB79_00250 (pnp)
03016 Transfer RNA biogenesis [BR:
tmed03016
]
DWB79_00250 (pnp)
Enzymes [BR:
tmed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DWB79_00250 (pnp)
Messenger RNA biogenesis [BR:
tmed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DWB79_00250 (pnp)
Transfer RNA biogenesis [BR:
tmed03016
]
Prokaryotic type
tRNA degradation factors
DWB79_00250 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_11
DUF6866_N
Motif
Other DBs
NCBI-ProteinID:
QSH96217
LinkDB
All DBs
Position
complement(55225..57327)
Genome browser
AA seq
700 aa
AA seq
DB search
MRQRVTYKIGNEELILETGHLAKQANGAIYAQYGGTAVLATVCASSTAVEGLDYVPVTVD
YNEKYYAAGKIPGGFIKREGRPKDKEILVSRLIDRPMRPLFEKAFGREIQIVPTCISSDM
INPPDILAVIASSAAVVISDIPFNGPVAGARVAYLDGEFVINPTFSQIEKADMEIVVAGT
AEGITMVEGGAHEVSEEVMLKALEKAHEFIKAICALQNELRAACGKEKLPLAPVNATLAN
KDAIYAKAYPELSKALYTKGKVERREACDVIRKALAEEYAKQLADETQAKLFAALFDDME
YHILRENILEKGLRVDGRGLEDIRPITCEIGVLPRPHGSAVFTRGETQSLAVVTLGTVFD
EQVYDDIEGDRRENFILHYNFPPYSVGEVGRLGTGRREIGHGHLAHRSLMPMIPSREAFP
YTIRVVSEILESNGSSSMATVCGGTLSLLHAGVPMKKPVAGIAMGLITDGNRFAVLSDIL
GEEDHLGDMDFKVAGTAEGITGFQMDIKIAGVSAEIMKKALEQAKKGRLHILGIMNQTIS
KPSEQVSKYAPRIETLKIPVDKIGALIGPGGKIIKALSEQYHVTINTENDGTVTIYGRDS
SSALGAKAAVTGIVEDPEVGRIYEGTVKCIKDFGAFIEILPGKEGLCHISKLSRSRIEKV
TDVLQEGQKVPVKLLEIDKLGRLNLSYIDACEEQEKTGSH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagacagagagtaacgtataagatcggaaatgaagagttaattttagaaacaggccat
ctggcaaaacaggcaaacggcgctatttatgcgcagtacggcggaaccgcagtgttggcg
acggtgtgtgcgtcgtctacggcagttgaggggctcgattatgtaccggtaaccgtcgat
tataatgaaaaatactatgcagcaggaaagataccgggcggttttatcaaacgtgaaggt
cgtcctaaggataaagagattttagtttcgcggctcatcgatcgtccgatgcgaccgttg
tttgaaaaagcgttcgggcgggaaattcagattgtaccgacctgtatttcctcggatatg
atcaatccgccggatattttggcggttattgcaagttcggctgcggttgttatttccgac
attccgtttaacgggccggttgcgggggctcgcgtggcatacctcgacggcgagtttgtg
ataaacccgacattcagccagattgaaaaggctgatatggaaatcgttgtcgcgggtact
gccgaaggcattacgatggtagaaggcggcgctcacgaggtttcggaagaggttatgctc
aaggccttggaaaaagcgcatgaatttatcaaagcaatctgtgcgctgcaaaatgagctc
cgcgcggcgtgcggcaaggaaaagctgccgcttgcaccggtgaatgcaacgctcgcaaat
aaagatgccatttatgcaaaggcgtatcccgaactttccaaagccttatacacaaagggc
aaggtagagcgccgcgaagcctgcgatgttatcagaaaggcgctggccgaagagtatgcg
aagcaactcgccgatgaaacacaggcgaagctctttgccgctttattcgacgacatggaa
taccatattttgcgcgaaaacatactggaaaaaggcttgcgggttgacggacgcggcttg
gaagatatccgccccatcacctgcgagatcggtgtgctgccgcggccgcacggttctgcg
gtgtttacccgcggggaaacacagtcgcttgccgttgttacactcggtactgtgtttgat
gaacaagtctatgatgatatcgaaggcgaccgccgagagaattttatcctgcattataac
ttcccgccctattcggtcggtgaggtaggacggcttggaaccggacgccgcgaaatcggg
cacgggcaccttgcgcaccgctccttgatgccgatgattccgtccagagaagcgttcccg
tataccatccgtgtcgtttccgaaattctggaatctaacggttcttcgtcaatggcaacc
gtgtgcggcggtacgctttcactgctgcacgccggcgtcccgatgaaaaaaccggtagcg
ggtatcgcaatggggcttatcaccgatggaaaccgctttgcggtactctcggatattctg
ggcgaagaagaccatctcggtgatatggactttaaagttgccggtaccgcagaaggtatc
accggtttccagatggatattaaaatcgccggcgtttccgctgagattatgaaaaaagcg
ctcgagcaggcaaaaaaaggccggctccatatcctcggcattatgaaccaaactatttcc
aagccgtccgagcaggtgtccaagtatgcgccgcggattgaaacgctcaagattccggtt
gataagatcggagcgctcatcggaccgggcggaaaaattatcaaggcgctgtccgaacaa
taccatgtaacaatcaataccgaaaacgacggtacggttaccatctacgggcgtgattct
tcatccgcgctcggcgccaaggctgcggttaccggcatcgtggaagatcctgaggtcggc
agaatttatgaaggtaccgttaagtgcatcaaggatttcggcgcctttatcgaaattctt
cccggtaaagaaggactctgccatatttccaaactatcgcgcagccgcatcgaaaaagtt
accgacgtgttgcaggaaggacaaaaagtacccgtcaagctgttggaaatcgataagctc
ggtcgcttaaatctttcgtatatcgatgcctgcgaagagcaggaaaaaaccggcagccat
taa
DBGET
integrated database retrieval system
