Treponema medium: DWB79_03515
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Entry
DWB79_03515 CDS
T07695
Name
(GenBank) DNA helicase UvrD
Organism
tmed
Treponema medium
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QSH96841
LinkDB
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Position
complement(780158..783766)
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AA seq
1202 aa
AA seq
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MIDICKDLNEHQKQAVKTDENAVVAAGAGSGKTKVLASRYVYLITEKNYQVEHILALTFT
DKAAAEMHRRIYRELQKMYAGTDDAVQRSRAGAALDSFFKAQIMTIDAFCHKIAVTACRR
FGISPDFTIDLAESKRLAYNLSLDFFLEHRADTNLQYLLGDKPITDFINDFFVKILNDYV
TVSRPIDFSEALQNQLAAAEPLFTGYRKQAERILGDIAAHLEGNDKYISAVKEAYMQLPE
FPLTLTEPQCPVFLGRLKAICSVKKTMGSKKDEDVKACKALCGELSESSGRLQSLYHFYA
HKEQMQKIYALCSVLQERFIAEKKRRSILHFGDIAQLAVNALITDPDLRLFYKKQTHRIM
IDEFQDNNSLQRDLLFLLAEKEARTDQSIPKPDELVPDKLFFVGDEKQSIYAFRGADVSV
FRTLSQDLRQGDCSASINLQTNYRTEPELLNFFNSVFMRVFYSETNQPLIGTVPAFEAEF
IPILSREAVPHLAPQTDIFFIDKKRFPKGADTAFLKPIECEAYTLAQKIAALHDEHYLVY
DDVSQATRPCTWSDFAVLLRASTHQAVYERFFRAFKIPYISVQQKGLFHDAPLNDICALL
RLAVYPHDRAVYAQVLRSPFVRLSDRSFTRLMLHSLEHTTQPFVPSAAEELDAEDRQYFL
NACTLFERLQGSIKKKSNAELITALWYDEGYRYILLTEPRYHRYLELYDYLFALAVKADA
AGQSLSAFIDTLISYIHAEERIEDMEIPLEHGGDAVKIMTVHKSKGLEFPIVCIPDCGNA
GKSEKKEGMVFLHKDLGPVIHLPPETKNDPPANIFFEELRQEANAKHLAETKRLLYVAVT
RAKVRLLMSGVQETDGDIEELPETPRALDEIRQQLVQPQKEENNRSFFQLLLPALSGDIN
CVHFTEVLPLSTSTVQHTTEDRQRFNLDETRALYRQAAEKNFPLAEPRVIPATQFEKDRQ
WLHLSEAPLAMFPNQHTPTQSVGVCCSHKVVAVGLSYPLSRRRAPGYETLRANQELQDME
HSQTMAQSKTMKHTELNEHIEQGDNTGEKDGDELSSTEFGTLVHKAMEARFLDRPCTLPA
KYAREVEKLCSAFLSSPLGQKATEASFRKTEYGFLTLYEGKLVIGQIDLLFEYEDTAYII
DYKTDQKIYPEQHRRQLLIYKAAVENFYKMEGFGQDTGGQQSPKSVKAYIFYLRSKTAVE
VV
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgatagatatttgcaaagatttaaacgaacatcaaaaacaggcggtaaaaacggatgaa
aatgccgttgtggcggcgggcgccggttcgggcaagacgaaggttctggctagccgctat
gtatacctgattaccgaaaaaaattatcaggttgaacatatccttgccctcacctttacg
gacaaggcggcggcggaaatgcaccggcgtatttatcgggagctgcaaaagatgtatgcg
ggaaccgatgatgcggtacaacggagccgtgccggcgctgcattggattctttttttaag
gcgcaaattatgactatcgatgcattctgtcataagattgccgtaaccgcatgccggcgc
ttcggtatcagtcccgatttcactatcgaccttgccgaatcgaagcgactcgcttataac
ctttcgctcgattttttccttgaacaccgcgcggacacaaacctgcaatatctgctcggt
gataaaccgattaccgattttatcaacgacttctttgtcaaaatattaaacgattacgtt
acggtctcccgcccgattgatttttctgaggccttgcagaatcagctggccgctgccgaa
ccattatttaccggctatcgcaaacaagccgaacgcattctcggagatattgccgcccat
cttgaaggaaacgataagtatatcagtgcagtaaaagaagcatacatgcaactccccgaa
ttcccgcttacactgaccgagccgcagtgccctgtctttcttggacggctgaaagcgatt
tgcagcgttaaaaaaacgatgggttcaaaaaaggatgaggacgtaaaagcgtgcaaggcg
ctctgcggtgaactgagcgaaagctccggccgcttgcaaagtctgtatcatttttatgca
cacaaagagcagatgcaaaagatatacgcactttgtagtgttttgcaggaacggttcatt
gccgaaaaaaagcggagaagcatattgcatttcggcgatattgctcagcttgccgttaac
gcgctcatcaccgatccagatttgcggctcttttataaaaaacaaacccatcggattatg
atcgatgagtttcaggataataacagccttcagcgtgacctcttgttcctgcttgcggaa
aaagaagcacgcaccgaccaatcgataccgaagccggatgagctggtgccggataaactt
ttctttgtcggggacgaaaaacaatcgatctatgcgtttcggggcgccgatgtttcggtg
ttccgcacgctatcgcaggacttgcggcaaggcgactgctccgcttctattaacctgcaa
acaaattaccgcactgaaccggaactgctcaacttttttaacagcgtatttatgcgggtc
ttttattcggaaaccaatcagcctcttatcggtaccgtgcctgcgtttgaagcggaattt
atccccatcctcagcagggaggcggttccccatttagcgcctcagacggatatcttcttt
atcgacaaaaaacgctttccgaagggcgccgacaccgccttcctcaaaccgattgaatgc
gaggcgtatacgcttgcgcaaaaaatagccgcgctccatgacgaacactaccttgtatac
gatgacgtctcacaggctacccgtccctgtacatggtcggattttgccgtgctgctgcgc
gcttcgacgcatcaagcagtctacgagcgtttttttcgtgcatttaaaatcccgtatatt
tccgtacagcaaaaaggattgttccacgatgcgccgctcaacgatatctgcgccttgctc
cgcctagcggtgtatccgcatgacagagccgtgtatgcgcaagtactccgctcgccgttt
gtccgcctcagcgaccgctcttttacccgattgatgctgcatagccttgagcataccacc
caaccttttgttccctccgctgccgaagaactggatgcggaagaccggcaatatttctta
aatgcctgcactctttttgagcggctccaaggctctatcaaaaaaaagagtaatgccgaa
ttgattaccgcactgtggtatgacgaagggtaccggtacatattgcttacggagccgcgc
taccaccgctatctggaactatatgattacctgtttgcgcttgcggtaaaagcggatgct
gcgggacagagcctttcggcttttatcgacacgctgatttcgtatattcacgcggaagag
cggattgaagatatggaaattccgctcgaacacggcggcgacgcggttaaaattatgacg
gtacataagagcaagggcttggagtttccgattgtctgtattcccgactgcggtaatgcg
ggaaagtctgaaaagaaagaaggtatggtctttttgcacaaggatttagggccggttatc
catttaccgccggaaacaaaaaacgaccctcccgccaatatcttttttgaggaacttcgg
caggaagcaaatgccaaacacctcgccgaaacaaagaggcttctctacgtcgccgttacg
cgagctaaggttcggctactaatgagcggtgtgcaggaaactgacggcgatattgaggaa
ctaccggaaacaccccgcgctttggacgaaatccggcaacagcttgtacaacctcagaag
gaagaaaataaccgaagtttttttcagctcttattaccggcgctatccggagatatcaac
tgcgtgcattttacggaagtgttaccgctctccacctcgaccgtacagcacaccacggaa
gaccggcagcgcttcaatcttgatgaaacccgtgccctataccggcaggctgcggaaaaa
aactttccgcttgcggagccgcgcgtcataccggcaactcaatttgaaaaagaccggcag
tggctgcatttaagcgaagcgccgcttgcaatgtttccaaatcaacataccccgacacaa
agcgtcggggtatgttgttctcataaggtggttgcagtcgggctttcataccctttatca
cggcgcagagcgccggggtatgaaaccctccgcgcgaatcaggaattacaagatatggaa
cattcacaaacgatggctcaatctaaaactatgaaacataccgaattaaatgagcatatc
gagcagggcgacaataccggtgaaaaggacggcgatgagctttcctccaccgagttcgga
accttggtgcacaaggcgatggaagcccgctttttagaccgcccgtgtacactgcctgca
aagtacgcccgggaagtggaaaaactgtgctctgcttttctttcttctccgctgggacaa
aaggccacagaagcctcattcagaaagaccgaatacggctttttaaccctctacgaagga
aagctcgtcatagggcaaatcgatttgctttttgaatacgaagataccgcgtatatcatc
gattataaaaccgaccaaaaaatctatcctgaacaacatcgaaggcagcttttaatctac
aaagctgccgtagaaaatttctataaaatggaagggttcggtcaagacaccggcgggcaa
cagtcacctaaatcggttaaagcctacattttctatcttcgcagcaaaaccgctgtcgag
gtagtgtag
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