Treponema medium: DWB79_05855
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Entry
DWB79_05855 CDS
T07695
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tmed
Treponema medium
Pathway
tmed00470
D-Amino acid metabolism
tmed00550
Peptidoglycan biosynthesis
tmed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tmed00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DWB79_05855 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DWB79_05855 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmed01011
]
DWB79_05855 (murD)
Enzymes [BR:
tmed01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DWB79_05855 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tmed01011
]
Precursor biosynthesis
Amino acid ligase
DWB79_05855 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
QSH97279
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Position
complement(1298551..1299984)
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AA seq
477 aa
AA seq
DB search
MMIRNLNDIAGLSVTIMGLGLNGGGLASARFFAENGAKEVIVTDMKTEEELAPSVAELRH
YPNVRFALGGHNIEDFRTADMVIKNPGVKSEGNPYLAAAQCIETDISIFLQLSSAPILAV
TGSKGKSSTVSALHYGLQQCGIRTFLGGNITVSPLTFLTETNSDTPVVLELSSWQLGDLA
QSPQLKPKIAIITHIMPDHQNWYGSMERYVADKKIIYRNQDKTDYTICNYDDDWGKIFAQ
ETAGQVFWYSAHPLPPYLLGAWIAPDGSARIRLKPDDDQLLLPSRIAVPGTALKQNVMAA
SLALALYGADLLQIPAVMKNYGGIPHRLEFFYETEQFKFYNDSAATIPEAAAAAVNAFEK
PVILITGGTDKKLDFTTLAPELKKAKAIFLLAGTGTDKLTPLLQAQHTPYFGSFQDLSTL
LEAVRREYEPTQQNTTAAEQEIVVFSPGATSFGMFKNEFDRGLHFKEAVRQCWPSGF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgatacggaatttgaacgatattgcaggtctttcggtaacgattatgggcctcgga
ttaaacggcggagggcttgcttctgcgcgtttttttgcagagaatggcgcaaaagaggtt
atcgtaaccgacatgaaaaccgaggaggagcttgccccctccgttgcagagctgcggcac
tatcctaatgtgcgttttgcgctcggcggccataacattgaagatttccgtaccgctgat
atggtaattaaaaatcccggcgtaaaatcggaaggaaatccatacctcgccgctgcgcag
tgcatcgaaaccgatatctcgatttttttacaactgagttccgcaccgatactcgccgta
accggcagtaaaggaaaatcctcaaccgtcagtgcgctgcactacggactgcagcaatgc
ggcatacggacattcctcggcggcaacatcacggtaagtccgctcaccttcttaactgaa
acaaactccgatactccggttgtgctggagctttccagctggcagctcggcgaccttgcg
caaagtccgcagttaaaacctaaaatagcaattattacccacattatgcccgatcatcaa
aactggtacggttcgatggaacgctatgtagccgacaaaaaaattatctatcgtaatcag
gataaaaccgattacaccatttgcaattatgacgacgactggggaaagatttttgcacag
gaaactgccggacaggttttttggtacagcgcacatccgctgccgccatatctgctcggt
gcatggatagctcccgatggatccgcacggatacggttaaaaccggatgatgaccaactg
ttgctgccttcacggatcgcagttcccggcacagcgctcaagcaaaatgttatggcagcc
tcgcttgctcttgcgttatacggcgccgatctgctgcagatccctgccgttatgaaaaac
tacggcggaattccccaccggctcgaatttttttacgaaacggagcaattcaaattttat
aatgattccgcagcaacgattcccgaagcggcagcagcagccgtgaatgcttttgaaaaa
ccggttatccttatcaccggcggcaccgacaaaaaactcgactttactacgcttgcaccg
gagcttaaaaaggcaaaagcaatatttttacttgcagggacgggtaccgataaattaaca
ccgctgctgcaagctcagcacactccgtatttcggctcctttcaagacctttctacattg
cttgaggcagtccgcagagaatacgaaccgacacagcaaaatacgactgctgcagaacaa
gaaatcgtcgtattttctcccggcgctacgagcttcggtatgtttaaaaacgagttcgac
cgcggcctccactttaaagaagccgtacgacaatgctggccttcagggttttga
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