Treponema medium: DWB79_09445
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Entry
DWB79_09445 CDS
T07695
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tmed
Treponema medium
Brite
KEGG Orthology (KO) [BR:
tmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmed03016
]
DWB79_09445
Enzymes [BR:
tmed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DWB79_09445
Transfer RNA biogenesis [BR:
tmed03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DWB79_09445
Prokaryotic type
DWB79_09445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QSH97967
LinkDB
All DBs
Position
complement(2134106..2135032)
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AA seq
308 aa
AA seq
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MNLEAFILGCGGMMPLPYRHLTSVLLRREGDLFLFDAGEGTQVSLRRLNLRWKKINTIFI
SHTHADHVTGLPGILMLSAQVDRDEPLYIIGPPKIKEYVETSRQVLDMYINYEIIIQEVS
EPGIVYKTDEFQVRAFWLEHTKPCLGYVFEEFPRPGAFDPEAARRLNVPCGPLWSKLQAG
MAVEAADGTVVESSQVLGPPRSGRKFSFVTDTKYLPSIAPEVAGSDFLVCESMFAKGMEQ
DAAEKKHMTCTQAAQIARDAAVKKMALIHYSPRYTDYDLKQLLKDAQEIFPNTVLSKDRM
VEPIEYQD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgaagcgtttatcttgggctgcggaggcatgatgcctttaccgtaccgtcat
cttacttcagtgctgcttcgccgtgaaggcgatttatttctttttgatgcgggagaaggc
acacaagtttccctgcgccgcctaaatctccgatggaaaaaaatcaataccatctttatc
agccatacccatgcggatcacgtaacggggttgccgggaattttgatgctatcggcgcag
gttgaccgtgatgagccgctctacattatcggccccccgaaaattaaagaatatgtcgaa
acaagtcggcaagttctcgatatgtatatcaattacgaaattatcattcaagaagtttcc
gaacccggcattgtatataaaaccgatgagtttcaagtgcgagcgttctggcttgaacat
accaagccttgtctcggctacgtatttgaggaattcccacggccgggagcattcgatccc
gaagcggcgcgcagacttaatgtcccctgcggaccactctggtcaaagctacaggcagga
atggcagtagaagcggcagacggtactgttgtagaaagcagccaagtactcggtccgcct
cggagcggcagaaaattcagctttgtaaccgatacaaaatatcttccgagcatcgcgccg
gaggttgccggctccgacttcttagtctgcgaatctatgtttgcaaaaggtatggaacag
gatgctgccgaaaaaaagcacatgacctgtacacaggctgctcaaattgcacgggacgcc
gcagtcaaaaagatggcgctgattcactacagtccccgttatacggactatgacttaaag
cagctgcttaaagacgcacaagagatattccccaatacggttctatcaaaagatcgaatg
gtagaaccaatcgaatatcaggattaa
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