Treponema medium: DWB79_10225
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Entry
DWB79_10225 CDS
T07695
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
tmed
Treponema medium
Brite
KEGG Orthology (KO) [BR:
tmed00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmed01011
]
DWB79_10225
Enzymes [BR:
tmed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DWB79_10225
Peptidoglycan biosynthesis and degradation proteins [BR:
tmed01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DWB79_10225
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM2_NFP
LysM_RLK
LysM3_LYK4_5
DUF3071
Motif
Other DBs
NCBI-ProteinID:
QSH98117
UniProt:
A0ABX7LYR5
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Position
2319967..2321289
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AA seq
440 aa
AA seq
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MCMCIRFTGKTPHIKHFCVGIIAGALCIHPIYASTQPKPGISDAEVLNKSLLQNFQSNTL
LHNTLIPHGHPLIEKFRKQYMCTDGYNYLSKIMKRSAPYRDFIIELLEAENMPAELLFLP
VIESGFFETATSKSGAVGIWQFMRNSVGGFNIHIDDWVDERRDPWKTSVAAVKKLKWNYS
QFNDWPLALAAYNSGVGTIRTAIKKAGKADYWYLAEHGYLKKETLYYVPKFLAIAEILSR
SEELNIDWGKTEDHQPTSTIEIKRAIDVRLLAEELGLESEAIRKLNPSLRYFITPPSIKY
QLRLPSAYTEAAQTVLSQSDKLLIKYYQYRIKSGDTLYALAKHYGVSVQSILNYNAGLKP
ETLKIGKTILIPALKSVGTYSGKSTAQAGNFDGTHTIRQGDTLWALALKYSVSVELLAQK
NNLSVNSVLKLGNTLKVPIL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgtgtatacgttttaccggtaaaacaccgcatataaaacacttctgcgtcggc
atcatagcaggggcattgtgtattcaccctatctatgcgagcacccagcccaaaccggga
atctcggatgcagaagtcttaaataaatcacttttacaaaatttccaaagcaatacatta
ctacataatacgcttattcctcacggtcacccgctaatcgaaaaattccgcaagcagtat
atgtgtaccgacggctacaactacctttcaaaaatcatgaagcgttccgctccataccgc
gattttatcatcgagctgctggaagcggaaaatatgcctgccgaactgctgtttctgcct
gtcatcgaatcgggtttttttgaaacagcaacttcaaaatcaggcgccgtcggaatttgg
caatttatgaggaacagtgtcggcggctttaacatccatatcgacgattgggttgatgag
cggcgcgatccatggaaaacgagtgtcgctgcggtcaaaaagctgaagtggaattacagt
caattcaatgactggccgcttgcactcgctgcctataacagcggagtaggaacaatacga
accgctatcaaaaaagccggcaaggcggactattggtatctcgcagaacacggatatcta
aaaaaggaaacactgtactatgtgccgaagtttcttgccattgcggaaatactttcccgc
agcgaggaactcaacatcgattggggaaagaccgaagaccatcagcccacttccaccatc
gaaatcaaacgggcaatcgatgtacggttgcttgcagaagagctcggacttgaatccgaa
gcgattagaaaactcaatccttcgctccgttactttatcacgccgccgagcatcaaatat
cagctgcgcctcccctcggcttatactgaagcggcacaaacagttctcagccaatcggat
aaactgctgataaaatactatcagtatcgtataaaatcgggcgacaccctctatgcgctc
gcaaaacactacggagtcagcgttcaaagcatcttgaactacaacgcaggtcttaaaccg
gaaacactgaaaataggaaagactattttaattcctgcattaaagtcggtcggaacctat
tcgggcaaaagcactgcgcaggcaggtaattttgacggtacgcatactatccggcagggc
gatacgctgtgggcacttgcgttaaaatactcggtttcagtcgaacttttagcccaaaag
aacaatctatcggtaaatagtgtcctcaagttagggaataccctaaaagtgccgatactg
taa
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