Thermocaproicibacter melissae: NOG13_00090
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Entry
NOG13_00090 CDS
T09029
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel03030
DNA replication
tmel03410
Base excision repair
tmel03420
Nucleotide excision repair
tmel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NOG13_00090 (polA)
03410 Base excision repair
NOG13_00090 (polA)
03420 Nucleotide excision repair
NOG13_00090 (polA)
03440 Homologous recombination
NOG13_00090 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmel03032
]
NOG13_00090 (polA)
03400 DNA repair and recombination proteins [BR:
tmel03400
]
NOG13_00090 (polA)
Enzymes [BR:
tmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NOG13_00090 (polA)
DNA replication proteins [BR:
tmel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NOG13_00090 (polA)
DNA repair and recombination proteins [BR:
tmel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NOG13_00090 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NOG13_00090 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WBY64154
LinkDB
All DBs
Position
16044..18614
Genome browser
AA seq
856 aa
AA seq
DB search
MKLLVLDGNSILNRAFYGIRLLSTKEGLFTNGIYGFLMIFHKLLTETEPDAVAVAFDMHA
PTFRHKEYAGYKANRKGMPPELAQQMPTLKELLKLLGYRIVECEGYEADDILGTLAKACE
EKNCECVLATGDRDSLQLVSPLVSVRLASTKMGQPQVTLYDEAKIKEDYGVTPKEMIEIK
ALQGDTSDCIPGVAGIGPKGASQLIQAYHSIDYIYEHLDELEIRDTLRKKLADGKENAFL
SRRLGTICTDAPIDTDLSHYVPAKRDTAAAVRLMAKLEFFKLIEKLGLDAAAQEPIAVET
ASAAVEMAESTDPAALLKELEHTGRADFTVKIENGAIKSMTVCTGGKIHILDDTKTIHAI
LTDESIRKNTHDVKPIFAALDRTGETLRGTVFDTLLAGYLLNPSASSYEPFRLAREYGVA
VPDGIPEECAAAAIMPQLADVLERKIAENGQTSLLNDIEVPLARVLALMENVGFAVDANG
IREFGKTLDAKITEIQQQIYDAVGYEFNINSPKQLGEALFDKLGLEHGKKTKTGWSTNAD
VLEKLRYESPVVDLVLSYRTLAKLKSTYCDGLLKVVAEDGRIHSSFNQTETRTGRISSTE
PNLQNIPVRTEIGREMRRFFVARPGWVLVDADYSQIELRVLAHVANDKNMIQAFLDHDDI
HRRTAAQVFHLPESMVTPLMRSRAKAVNFGIVYGIGPFSLSQDIHVSVREAKQYIADYLA
HFSGVDDYMKRVVEDAKEKGYVETMFGRRRYLPELASSNHNLRAFGERVARNMPIQGTAA
DIIKIAMIRVVNRLEREKLRARLILQVHDELIVEAPAEEALQVATLLTEEMQNAVSLSVP
LTADAKIGETWYEAKA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactggtattagacgggaacagcatattgaaccgagcgttctacggaattcgc
cttctgagtacgaaggaaggccttttcaccaatggcatttacgggttcctgatgattttt
cacaaattgctgacggaaacggaaccggacgcggttgccgttgcttttgatatgcacgct
cccacgttccgccacaaagaatatgcgggctacaaggcaaaccgaaaagggatgccgccg
gagctggcgcagcagatgccgacgctcaaggagctgttgaagctcctcgggtaccggatt
gtggagtgcgaaggctatgaagccgatgatatcctcggtacgctcgccaaggcttgtgaa
gagaaaaactgtgaatgtgtgctggctacgggcgaccgcgacagcctgcagctggttagc
ccgctcgtttcggtgcgccttgcatcgaccaaaatgggacagccgcaggtgacgctctac
gacgaagcgaaaatcaaagaggattacggcgttaccccgaaggaaatgattgaaatcaag
gcgcttcaaggcgatacctccgactgcatccccggcgtcgcgggcatcggcccgaagggc
gcgagccaattgattcaggcataccactccattgattatatttacgagcatttggacgag
ctggagattcgcgacacgctccgcaaaaagctcgcggacggaaaagagaacgccttcctc
agccgcaggctcggaaccatctgcaccgatgcgccgattgacacggacctttcccactat
gtcccagcaaagcgggacacggccgctgccgttcggctgatggccaagctcgagttcttc
aagctgattgaaaagctcggcctcgacgccgccgcgcaggagccgattgccgtggaaacc
gcctcggccgctgtcgaaatggcggaaagcaccgaccccgccgccctgctgaaagaactg
gagcacaccgggcgcgcggatttcaccgtgaaaatcgaaaacggtgccataaaatccatg
acggtttgcacgggcgggaaaatccatattctggacgatacgaaaaccatccacgccatt
ctgacggatgaaagcatccgcaaaaatacccacgatgtgaaaccgattttcgccgcgctc
gaccgcaccggagaaacgctgcgtggcacggtgtttgacacgctgctcgcagggtatctg
ctgaacccgtcggcctcaagctacgagccgttccgccttgctcgcgaatacggcgtggcc
gtgccggatgggattccggaagaatgtgcggccgccgcaatcatgccccagcttgccgac
gtactggagcgcaaaattgccgaaaacgggcagacttcgcttttgaacgatattgaagtc
ccgctcgcgcgcgttctcgcgctgatggaaaacgtcggctttgcggttgacgcaaacggt
attcgggaattcggaaaaacgctcgatgcgaaaatcaccgaaatccagcagcaaatttac
gacgcggtcggctacgaattcaatatcaactcgccgaagcaactcggcgaagctcttttt
gacaaactcggccttgagcacggcaaaaagacaaaaaccggctggtccacaaacgcagac
gtgctggaaaagctgcgttacgaaagccccgttgtggaccttgtgctctcttaccgcact
ctggcaaagctgaaatcgacgtactgcgacgggctgctcaaggtcgtcgcggaggacggg
cgcatccattcgagcttcaaccagacggaaacgcgcaccggccgcatcagctccaccgag
ccgaacctgcagaacatccccgtccgcacggagattgggcgtgaaatgcgccgctttttt
gtcgcgcggccgggctgggttcttgtggacgctgactactcgcagattgagctgcgggta
ctcgctcacgttgcgaacgacaaaaacatgatacaggcttttcttgaccatgacgacatt
caccgccgaaccgccgcgcaggtgttccatctgccggaaagcatggtaacgccgctgatg
cgcagccgggcaaaggccgtgaacttcggcattgtctacggaatcggcccgttctcgctt
tctcaggacattcacgtctccgtgcgcgaagcgaagcagtacatagccgactaccttgcc
catttctccggcgtagacgactacatgaagcgcgttgtggaggacgcaaaggaaaaaggc
tatgtggagaccatgttcgggcggaggcgctatcttccggaacttgcaagctccaaccac
aacctgagggcgttcggcgaacgtgttgcgcgcaatatgccgattcaaggcaccgcggcc
gacatcatcaagattgcgatgattcgcgtggtgaaccgcctcgaacgcgaaaagctgcgc
gcgcgtctgattcttcaggtgcacgacgaactgattgtagaagcgcccgccgaagaagcg
ctgcaagtggcgactctgctgacggaggaaatgcagaatgccgtttcactctccgtcccg
ctgaccgccgacgctaaaatcggcgaaacatggtacgaggcaaaagcatga
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