Thermocaproicibacter melissae: NOG13_01430
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Entry
NOG13_01430 CDS
T09029
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tmel
Thermocaproicibacter melissae
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmel03016
]
NOG13_01430 (truB)
Enzymes [BR:
tmel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NOG13_01430 (truB)
Transfer RNA biogenesis [BR:
tmel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NOG13_01430 (truB)
Prokaryotic type
NOG13_01430 (truB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DMA
Motif
Other DBs
NCBI-ProteinID:
WBY64404
LinkDB
All DBs
Position
283371..284285
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AA seq
304 aa
AA seq
DB search
MTGILIMDKPAGFTSFDVVAVMRGVCRERKIGHTGTLDPMATGVLPLLLGTATRALPFLP
DTDKEYEAGFRLGLATDTQDSTGKTIAESSVRASRAQLESVLPRFRGDILQTPPMYSAVS
VNSQRLYDLARRGIEVERKKRPITIFRLELLEFDEATQSGRLSVSCSKGTYIRTLCADIG
EALGTYGVMTSLRRTRAAGYSLSDAVTLEQAKALAAEGRIAERVLPVESLFTSYPAVTVS
AAQAVRFSNGGALDLSRTSLRSAQLSDGSRFRVLSPENVFLGLGEVRDKNLAVLRLFPRE
GGTK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgactggcatcctcataatggacaagccggcgggctttacttcctttgatgtagttgct
gttatgcgcggtgtctgccgcgaacgcaaaatcggccacaccggcacactcgacccaatg
gcaacaggcgttctgccgctcctcctcggaacggccacacgcgcgctgccattccttccc
gacacagacaaagagtacgaggcggggttccgcctcggccttgcaaccgatacccaggac
agcacgggcaagacgattgcggaaagctccgtgcgtgcttcgcgcgcccaactggaatcc
gttctgccccgtttccgcggcgacattctgcagacgccgccgatgtattccgccgttagc
gtgaacagccagcgcctctatgaccttgcgcgccgcggcattgaggtggaacgcaaaaaa
cggcccatcaccatattccggctggaactcttggagttcgatgaagctacgcagagcgga
cgtctttccgtttcctgctccaaagggacctatatccgcaccctctgtgcagacatcgga
gaagcgctcggtacatacggcgtgatgacctccctgcgccgcacacgagcggctgggtat
tcgctttccgacgctgtcacgcttgagcaggcaaaagcgcttgcggcggagggacgaatc
gccgagcgtgtgcttccggtggaatcgctgttcacctcctatccggcggtaacggtatcc
gcggcacaggcagtgcgcttttcaaacggcggcgcactcgacctctcacgcacctccctg
cgcagcgcgcagctcagcgacggaagccgtttccgcgtgctttcgccggagaatgtgttc
ctcggcctcggtgaagtgcgggacaaaaatctggctgttctccgtctgttccccagagaa
ggcggaaccaagtaa
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