Thermocaproicibacter melissae: NOG13_03355
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Entry
NOG13_03355 CDS
T09029
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel00300
Lysine biosynthesis
tmel00470
D-Amino acid metabolism
tmel01100
Metabolic pathways
tmel01110
Biosynthesis of secondary metabolites
tmel01120
Microbial metabolism in diverse environments
tmel01230
Biosynthesis of amino acids
Module
tmel_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NOG13_03355 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NOG13_03355 (dapF)
Enzymes [BR:
tmel01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NOG13_03355 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
WBY64743
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Position
654546..655379
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AA seq
277 aa
AA seq
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MKFTKMQGIGNDYIYINCFEEKVDDPSALSIRLSDRHFGIGSDGLILIEPSDIADCKMDM
YNADGSRGMMCGNGIRCVGKYVYERGIAKKDVLTVETLSGVKTLKLSVKDGKVGEIEVNM
GSPILEPEKIPASFQGEKVVNQPLTVGGKEYRVTCVSMGNPHCIVFVPDTKSLPIEKIGP
QFENHPAFPERVNTEFVQVHSEHEVSMRVWERGSGETLACGTGACATAVACVLNQKTGRE
VLVHLLGGDLNIRWDEISNNVFMRGPAEFSFDGTVEI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacaaaaatgcaaggtatcggcaacgactacatttatattaactgctttgaa
gaaaaggtggacgatccgtccgctttgtccattcgcctgagtgaccgccattttggcatt
ggttccgacgggcttattctaattgagccatctgatatcgccgactgcaaaatggatatg
tataacgccgacggttcacgcgggatgatgtgcggaaacggaatccgttgtgtgggaaaa
tacgtttacgagcgcggaatcgccaagaaagacgtgttgacggttgaaacgctgagcggg
gtaaaaacgctgaagctgagcgttaaagacgggaaagtcggggagatcgaagtcaacatg
ggaagcccgattctggaaccggagaaaatacctgcatctttccaaggggagaaggtagtt
aaccagccgttgacggtaggcggtaaggagtaccgtgttacctgtgtttccatggggaat
ccgcattgcattgtctttgttccggatacaaaatccttgccaattgagaaaataggcccg
caatttgagaatcaccccgcatttccggaacgtgtcaacacggaattcgtacaagtgcac
agcgagcatgaagtcagcatgagagtatgggaacgcggctcaggcgaaacgcttgcctgc
ggaaccggggcgtgtgcaactgctgttgcctgtgtgctgaaccaaaagacggggcgcgaa
gtgcttgttcacctgcttggcggcgacctgaatatccgttgggatgaaatttccaataat
gtatttatgaggggtcccgctgaattttcttttgacggaaccgtcgaaatctga
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