Thermocaproicibacter melissae: NOG13_04005
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Entry
NOG13_04005 CDS
T09029
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tmel
Thermocaproicibacter melissae
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmel03019
]
NOG13_04005 (rnc)
03009 Ribosome biogenesis [BR:
tmel03009
]
NOG13_04005 (rnc)
03036 Chromosome and associated proteins [BR:
tmel03036
]
NOG13_04005 (rnc)
Enzymes [BR:
tmel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NOG13_04005 (rnc)
Messenger RNA biogenesis [BR:
tmel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NOG13_04005 (rnc)
Ribosome biogenesis [BR:
tmel03009
]
Eukaryotic type
90S particles
RNase
NOG13_04005 (rnc)
Prokaryotic type
rRNA processing factors
NOG13_04005 (rnc)
Chromosome and associated proteins [BR:
tmel03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NOG13_04005 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WBY64864
LinkDB
All DBs
Position
complement(795050..795724)
Genome browser
AA seq
224 aa
AA seq
DB search
MKELEEKLQYHFKNPQYLKTALTHSSYANEYRVPEGSNERLEFLGDAVLGAIVADYLFKN
FPKLPEGELTKRRAALVCEKACCGFSKEIGLGKYLLLSHGEQNSGGRSRPSILADAFEAV
TAAIYLDGGIEAARTFVLRYVLPLLRQGRPKAMKDYKTALQEIVQKNPEDHLEYVLTGES
GPDHEKHFLVEVRLDGNTMGKGGGRSKKEAEQQAAREALKLMGY
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactggaagaaaagcttcagtatcatttcaagaatccccagtatctcaaaacc
gcgctcacccattcttcctatgcaaacgagtatcgtgttccggaagggagcaacgaacgg
ctggagtttctgggggacgcggttttgggagcaatcgttgccgattatctttttaagaat
ttccccaagcttccagagggggagctgacaaaaaggcgtgcagctcttgtgtgtgaaaaa
gcgtgttgtgggttttcaaaagaaatcggccttggcaaatacctgttgctgagccatgga
gaacagaattccggaggacgttccagaccctccatcctcgcggatgcctttgaagcggta
acggccgccatatatttagacggcggcattgaggctgcacgaacctttgtacttcgttat
gttctgccgctcctgcgccaaggaagaccaaaggcgatgaaagattataaaaccgctctt
caggagattgtccaaaagaatccggaagatcatttggagtatgtcctgacgggcgaaagc
ggtcccgaccatgaaaaacattttctcgttgaagtgcgtcttgacggcaatactatggga
aaaggtgggggccgtagcaaaaaagaagcggagcagcaggcagcgcgtgaggcactgaag
ctgatgggatattga
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