Thermocaproicibacter melissae: NOG13_04020
Help
Entry
NOG13_04020 CDS
T09029
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmel
Thermocaproicibacter melissae
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmel03032
]
NOG13_04020 (topA)
03400 DNA repair and recombination proteins [BR:
tmel03400
]
NOG13_04020 (topA)
Enzymes [BR:
tmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NOG13_04020 (topA)
DNA replication proteins [BR:
tmel03032
]
Prokaryotic type
DNA Topoisomerases
NOG13_04020 (topA)
DNA repair and recombination proteins [BR:
tmel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NOG13_04020 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DmmA-like_C
HVO_2753_ZBP
DNA_ligase_ZBD
Zn_ribbon_GRF
DUF5817
Toprim_4
Auto_anti-p27
HypA
Motif
Other DBs
NCBI-ProteinID:
WBY64867
LinkDB
All DBs
Position
complement(798135..800216)
Genome browser
AA seq
693 aa
AA seq
DB search
MSKLVIVESPAKAKTIQKYLGPGYDVIASMGHVRDLPENRLSVDVKNNFKPKYDIIKGKE
KLVEKLKDKAEKSDGVLLATDPDREGEAISWHLAYLLGLSTEEKNRITFNEITKSGIKEG
MEHPRTIDQNLVNAQQARRILDRLVGYKLSPFLSQKIRHGLSAGRVQSVAVRLIVDREEE
IRAFVPEEYWSIEAKFSPKGSRKVFVASLYGDENGKIKIENKEQSDRILSELQDAEYVVT
NVKKGTRRKSPVPPFTTSTMQQEASRKLGFQARRTMKVAQELYEGVEIAGMGAIGLITYM
RTDSLRVSEEAIQAAADFIKETWGEKYLPDTPRHYKSRANAQDGHEAIRPTMPSLTPDKV
KDSLSSDQYKLYKLIWERFIASQMANCIQNTVQATIQAKNYIFKASGYTVKFDGFTTLYE
ESADEAKKDEGTLPELENGMPLKLKEIAGNQHFTQPPPRYTEASLIKALEENGIGRPSTY
AVIISTITAREYVVREGKALKPTELGEAVVKLMKERFPKIVNVKFTAQVESDLDDVQSGK
TDWVEELKNFYGDFDATLKAAKEAMKGVKIQLKEDVTDVICEKCGRHMVIKTSRYGKFLA
CPGYPECKNVKKYVETNGAECPKCGGKVVIKRTKKGRIFYGCSNYPQCDFVSWDEPSKEK
CPRCGKTLLKKKGKKPKYYCITPGCGYEKTEEE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaaacttgttattgtagaatcacctgccaaggcaaaaacaattcaaaagtatctt
ggccccggttacgatgtaatagcatccatgggccatgtgcgtgatctgccggagaatcgt
ctcagtgttgatgtaaaaaacaatttcaagccgaaatatgacattataaagggaaaagag
aagctggttgaaaagctcaaagacaaagcggaaaagagcgatggcgtgctcctcgcaacg
gaccctgaccgggaaggagaggcgatttcgtggcatctagcttatcttttgggcttgagc
acggaagaaaagaacagaataacctttaacgaaatcacaaaaagcggaattaaggaaggc
atggaacatccgcgcaccatcgaccagaatctcgtgaatgctcagcaggcaaggcgaatt
ttggaccgtcttgtcggctataagcttagcccgttcctttctcaaaaaatccgccatggc
ctttcggcaggccgtgttcaatctgttgcggtgcgtcttatcgtagaccgtgaagaggaa
atccgtgcgtttgttccggaggaatattggtcgattgaagccaaattttctccgaagggc
tctcgtaaagttttcgtggcttctctttacggcgacgaaaacggcaagataaaaattgaa
aacaaagagcagtctgaccgcattttaagcgaactgcaggatgcggaatatgtggtaaca
aacgtgaaaaagggaaccagaagaaaatctccggttcctccgttcaccacttcaaccatg
cagcaggaagcatcccgcaagctcggctttcaggcacgcagaaccatgaaagtcgcgcag
gaactttacgaaggcgtggaaattgctggcatgggcgcaatcggtttgattacttatatg
agaaccgactcacttcgtgtctcagaagaagcaattcaggctgcggctgattttattaaa
gaaacatggggcgagaagtaccttccggatactccgcgccactataaatccagagccaac
gcacaggacggacacgaagcgattcgtccgaccatgccaagtctcacaccggacaaagtt
aaggacagtctttcatccgaccagtataaactctataagcttatctgggagcgttttatc
gcaagccagatggcaaactgcattcaaaacaccgtgcaggctaccattcaggcaaaaaat
tatatctttaaggcatctggatacactgtaaagtttgatggctttacaaccttgtatgaa
gaatcagcagatgaagctaaaaaggacgaaggcacattaccggaactggaaaatggcatg
cccctgaagctgaaagaaatcgcgggtaatcagcattttactcagccgccgccgcgttac
accgaagcttctttgattaaagcgcttgaagaaaacggaatcggacgcccgtcgacgtat
gctgtcataatctctaccataacagcaagagaatatgtcgttcgggaaggaaaggctttg
aagcccacagagctcggcgaagctgtcgtgaagcttatgaaggaacgcttcccgaaaatc
gtcaatgtcaagttcactgcacaggttgagagtgatctggacgatgtccagagcggaaaa
accgactgggtggaggaactgaagaacttctacggagattttgacgctactctgaaggct
gctaaagaggccatgaagggtgtcaaaattcagttgaaagaagacgtgaccgacgtcatc
tgtgaaaaatgcggccgtcacatggtcattaaaaccagccgttacgggaaatttcttgct
tgtccgggatacccggagtgcaaaaacgtcaagaaatatgttgagaccaacggcgcagaa
tgtccgaaatgcggcgggaaagtcgttattaaacgcaccaagaaaggccgcatattttac
ggctgctccaattacccacaatgcgattttgtctcttgggacgagccgtcaaaggagaag
tgcccacgctgtggcaaaacccttctgaaaaagaaaggaaagaaaccgaagtattactgc
attaccccgggttgcggttatgaaaaaacggaggaagaatga
DBGET
integrated database retrieval system
