| Entry |
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| Name |
(GenBank) PD-(D/E)XK nuclease family protein
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| KO |
| K16899 | ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] |
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| Organism |
tmel Thermocaproicibacter melissae
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| Brite |
KEGG Orthology (KO) [BR:tmel00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:tmel03400]
NOG13_04490
Enzymes [BR:tmel01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NOG13_04490
DNA repair and recombination proteins [BR:tmel03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NOG13_04490
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(904718..908050)
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| AA seq |
1110 aa
MLQLILGRSGSGKTYTVRSTLKTLAENGAERLMLIVPEQASFENERAMLHLLGDRGARKV
TVTSFTRMVDAVQRKYGGFAGRRLDDGGRSIFMSLALEQVRDQLKVFRKNSESTELVGLL
LQISAEMKMCGILPEKLEKASHGIVQSTLRQKTEEIALILSAYDALVAQSFIDPLDDLTR
LKDILSKHDFFTGYTVMVDAFQSFTVQEYEILEIILRQADMVSVTLCTDSLDGPEGDLFA
IGRNTAKALLRLAAENGVQVKKPVFLQGGARFANPALAELEKRVYRPGFAPWNEACSGVM
IYQAKDRYDEANFVSASISHLVREEGYRYRDFAIIIRSTEPYDGILDAALEHWEIPYFMD
RPERVDAEPLMRLLLSAFRIVIYGFRSDDMFLYLKTGLAGLTTAQISELENYTFVWNISG
KKWCEEWTENPEGFSGPMDEKQAQRLKEINESRRIVVEPLQRFAKRVGNAEGIQIAAAAY
QLLCDVHAAEHLRKYAEKLEQDGDPVLAERELRTWDLLMSILDQTALVIGKTKLSCERYA
ELLNLIICSSRMASIPQRLDEVLVGDANRIRAEGPKVVFVVGAVQGEFPMAPGGDCVFSD
RERRELIRLGLPLNDTMVGVVLQERFLAYSALTAASEKLYITYPESDGAGKALLPSTIPE
ETKKALPQIPVVDAEDFLPLWFACAEKPALELAAQKWNSNDELSASLKEVFARRESGSRL
AAAGRAAGKQPVSFQDKTLARSFFGKDIRLSATQIETFEKCRFQYFCRYGLNVQEQRPAE
LNALEYGSLMHYLLQRLFQELGSEKILTLSEKELHAEILGFLDDYVKNNFGDMQAKTPRF
VYLVSRIADSAQIVALHIAKELSQSGFVPTDFELEIGSSVGELVISLPDGSSVRIDGKID
RVDIMEKDGVKYLRILDYKTGEKEFRLSDLLYGQNMQMLIYLAALCENGKKRYGEFQPAG
VLYMPANRPSLSVARGTAADKLESKYDEKLRMDGLVLDIPEVISGMDSSEKGKYIPVKLK
DGVPDKLDHVASPQELQAILEYLKQTIAEMSVELQKGNVAALPLNGSKLDACKQCPYRPV
CGHEKDDEVRLMQDFSRDEAMKEIQGGGNK |
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| NT seq |
3333 nt +upstreamnt +downstreamnt
atgctgcagctgatcttgggccgctccgggagcggcaagacctatacggttcgttccacg
ctgaaaacacttgcggagaacggcgccgagcgcttgatgctcattgtccctgagcaggca
tcttttgaaaacgaacgtgccatgcttcaccttttaggagaccgcggcgcgagaaaagta
accgtcacgagctttacacggatggtagacgctgtgcagcgaaaatacggcggttttgcc
ggaagacgcctcgatgacgggggacgaagcatctttatgagccttgccctcgagcaggtg
cgcgaccaactgaaggttttccgaaagaattcggaaagtacggaacttgtcggcctgctt
ctgcagatttcggctgaaatgaaaatgtgcggcattctgcccgaaaaactggaaaaagca
tcccacggcattgtgcagagcacgcttcgccaaaagacggaggaaatcgcgctgattctc
tccgcttatgatgcacttgtcgctcaaagctttatagaccccctagatgatttgacgagg
ctgaaggacattctttccaaacacgatttcttcacaggatacacagtcatggtagatgct
tttcagagctttaccgttcaggaatatgaaatacttgaaatcatactccgccaggcagac
atggtttccgttacgctgtgcacagacagcctggatggtccggaaggggacttgttcgcc
atcgggcgaaatacagcaaaagcgcttttgcgcttggctgctgaaaacggcgtacaagtg
aaaaaacccgtgtttctgcagggcggagcacgctttgccaaccccgcacttgctgagctg
gaaaaacgggtttaccgccccggctttgcaccttggaatgaggcttgcagcggggtgatg
atttatcaggcaaaggaccgttatgacgaagcaaattttgtgagtgcttccatcagccac
cttgtgcgtgaggaaggctatcggtaccgtgactttgcaatcattatccgctccacggaa
ccgtatgacggcatccttgacgcggcgctggagcattgggaaatcccgtattttatggat
cgcccggaacgagtggatgcggagccgctgatgcggctgcttctcagcgcgtttcgcatt
gtaatctacggtttccggtcggacgatatgttcctttacttaaaaacgggacttgccggc
ctgacgacagctcaaatttcagaacttgagaattatacattcgtctggaacatttccggc
aaaaagtggtgtgaggaatggacggagaatcccgaaggattttccggcccgatggatgaa
aagcaggcgcagcggctgaaagaaatcaacgaaagccgccgcatagtagtagaaccgctt
cagcggttcgcaaagcgagtgggaaatgcggaaggaatccaaatcgcagcagctgcttat
cagcttctctgtgatgttcatgcggcggaacatctgcgaaaatatgcggaaaagctcgaa
caagacggagaccctgtgctggccgagcgagagctccgcacatgggaccttctgatgagt
attcttgaccagacagcgcttgtcatcggcaagactaaactttcgtgtgagcgatatgca
gagcttctgaatttgattatttgctccagccgaatggcaagcattccgcaaaggcttgac
gaagtgctggtgggagacgcgaaccgaatccgggcggaaggccccaaagtggtgtttgtc
gtaggcgcggttcaaggagaattcccaatggcgccgggcggcgactgtgttttcagcgac
agggaacgtcgggaattgattcgcctcggtctgccgctgaatgatacgatggtcggcgtg
gtgcttcaagagcgcttccttgcctattcggcgctgacagccgcatcggagaaactctac
ataacgtaccccgaatccgacggggccggtaaagctttattgccgtctaccattcccgaa
gagacgaaaaaagcacttccgcagattcctgtggtggatgcagaggattttttgcctctt
tggtttgcgtgtgcagaaaagcctgcactggagcttgcagcgcagaagtggaattcaaac
gatgagctttctgcttctttaaaggaagtctttgcccgcagagaatccggaagcagacta
gctgcagcgggcagagccgccggaaaacagccggtttcttttcaagacaaaacccttgcg
cggtcgttctttggaaaggacatccggctttctgcaacccagattgaaacatttgaaaag
tgccggtttcaatatttctgccgctatgggctgaatgttcaggaacagcggcctgcggaa
ctaaatgcgctggagtacggcagcctgatgcattacttgctgcaaaggctttttcaggag
cttggcagtgaaaaaattctcactctctcggaaaaggaacttcatgccgagattctcggc
ttccttgacgattacgtcaaaaacaacttcggggatatgcaggcgaaaaccccgagattt
gtctatctcgtttcccgaatcgccgattctgcgcaaatcgttgcgctacatattgccaaa
gagctttctcagagcggttttgtcccgacagattttgaattggaaatcggttcgtcggta
ggagaactagtcatttcgctgccggatggaagcagcgttcggattgacggaaaaattgac
cgtgtggatatcatggagaaagacggtgtcaagtatctccgaattcttgactacaagacc
ggagaaaaagaatttcgtctttcagaccttttgtacggccagaatatgcagatgttgatt
taccttgcggcgctttgtgaaaacggcaaaaagaggtatggagagtttcagccggccggt
gttctctacatgccggcaaaccggccgtcgctttcggtagcccgcggaacagctgccgac
aaactggaaagtaagtatgacgaaaagctgcgcatggacggtttggtactggacatcccc
gaagtcatcagcggcatggattcatcggaaaaaggaaagtacattccggtaaaactgaaa
gacggcgttccggataagctcgaccacgttgcttctccgcaggagcttcaagcgattctg
gaatatttgaaacaaacgattgccgaaatgtcggtggaactgcaaaagggcaatgtcgcc
gctttaccgctgaacggcagcaagttggatgcctgcaagcagtgcccgtaccggccggtg
tgcgggcatgagaaggacgacgaggttcggctgatgcaagatttcagcagagatgaagcg
atgaaggaaatacaaggaggcggaaacaaatga |
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