Thermocaproicibacter melissae: NOG13_05540
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Entry
NOG13_05540 CDS
T09029
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NOG13_05540 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmel03019
]
NOG13_05540 (groL)
03110 Chaperones and folding catalysts [BR:
tmel03110
]
NOG13_05540 (groL)
03029 Mitochondrial biogenesis [BR:
tmel03029
]
NOG13_05540 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tmel04147
]
NOG13_05540 (groL)
Enzymes [BR:
tmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NOG13_05540 (groL)
Messenger RNA biogenesis [BR:
tmel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NOG13_05540 (groL)
Chaperones and folding catalysts [BR:
tmel03110
]
Heat shock proteins
HSP60 / Chaperonin
NOG13_05540 (groL)
Mitochondrial biogenesis [BR:
tmel03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NOG13_05540 (groL)
Exosome [BR:
tmel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NOG13_05540 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NOG13_05540 (groL)
Exosomal proteins of breast cancer cells
NOG13_05540 (groL)
Exosomal proteins of colorectal cancer cells
NOG13_05540 (groL)
Exosomal proteins of bladder cancer cells
NOG13_05540 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_TAC_11
Motif
Other DBs
NCBI-ProteinID:
WBY63437
LinkDB
All DBs
Position
complement(1118213..1119841)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKQIKYGEDARKALLSGVNQLADTVKITLGPKGRNVVLDKKYGAPLITNDGVTIAKEIE
LDDPFENMGAQLVKEVATKTNDVAGDGTTTATLLAQCLIREGMKNVAAGANPMEIHKGIQ
AAVDVAVETLKKNSKKVSGPDDIARVASISASNDFIGKLISEAMQKVTSDGVITVEESKT
AETYSEVVEGMMFDRGYVTPYMVTDTEKMEAVIDDASILITDKKISNIQEILPLLEKIVQ
AGKKLLIIAEDVEGEALSTLILNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVIS
SELGLELKETTLDQLGHARQVKVDKENTIIVDGSGDKKAIADRVAQIRAQIEKTTSDFDK
EKLQERLAKLSGGVAVIKVGAATEVEMKEKKLRVEDALSATKAAVEEGIVAGGGVALINT
IPAVQALVDKSEGDVKTGAKIVLRALEEPVRQIAYNAGLEGSIIIDAIKKSGKIGYGYDF
ANNKYGDMISLGIVDPTKVTRSALQNAASVASMVLTTESLVADKKEPAQNNAAAGGDMGG
AY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacagatcaaatatggcgaagatgcgagaaaagcacttcttagcggcgttaat
cagcttgccgataccgttaaaattacactcggaccgaagggtcgtaacgtcgttctcgac
aaaaaatatggcgcaccgctcatcaccaatgacggtgtaaccattgcaaaggaaatcgaa
ctcgacgatccgtttgagaacatgggtgctcagctcgtcaaggaagttgccacaaagacg
aacgatgtggctggcgacggtaccaccaccgcaaccctccttgcacagtgcctcattcgc
gaaggcatgaagaacgttgctgccggtgctaacccgatggagattcacaagggcattcag
gctgctgttgatgtagcagttgagaccctgaagaagaactccaagaaggtttccggcccg
gacgacattgcccgtgttgcttcgatttctgcttccaatgactttatcggcaaactgatt
tcggaagcaatgcagaaggttacttccgacggcgttatcaccgtggaagaatccaagact
gctgaaacctattccgaagttgttgaaggtatgatgtttgaccgcggctatgttactcct
tacatggtcacggataccgagaagatggaagccgtcattgacgatgcctccattctgatt
acggacaaaaagatttctaacattcaggaaatcttaccgctcctcgagaagattgttcag
gccggcaagaagctcctcatcatcgcagaagatgttgaaggtgaagcactcagcactctg
atcctgaacaaactccgcggcaccttcacttgcgttgctgttaaggctccgggcttcggt
gacagacgcaaagaaatgcttcaggatattgctattctcactggcggtcaggttatctcc
tctgaacttggccttgaactgaaagagacaactcttgatcagctcggccatgcacgtcag
gtcaaggttgacaaagaaaacaccattattgttgacggctccggtgacaagaaagcaatt
gctgaccgtgttgctcagattcgcgctcagattgaaaaaacaacttccgatttcgacaaa
gagaagctccaggagcgccttgcaaagctgtccggcggcgtagcagtcatcaaagtcggc
gctgcaacagaagtcgaaatgaaagagaagaagctccgcgtggaagacgccctttctgct
acgaaagctgctgttgaagaaggcattgtagcgggcggcggcgttgctctcatcaacacc
attccggctgtccaagcccttgttgacaaatccgaaggcgacgtaaagaccggtgcaaag
attgttctccgcgcactggaagagccggttcgtcagattgcttacaatgctggcctcgaa
ggctccatcatcatcgacgccatcaagaagtccggcaagatcggctacggctacgacttt
gcgaacaacaagtatggcgacatgatttccttaggcatcgtagacccgaccaaggtaact
cgttccgcactgcagaacgctgcctctgtcgcttctatggttctcaccaccgaatccctt
gttgctgacaagaaagagcctgctcagaataatgcagctgctggcggcgacatgggcggt
gcgtattaa
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