Thermocaproicibacter melissae: NOG13_05700
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Entry
NOG13_05700 CDS
T09029
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NOG13_05700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmel03400
]
NOG13_05700
Enzymes [BR:
tmel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NOG13_05700
DNA repair and recombination proteins [BR:
tmel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NOG13_05700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
PIF1
T2SSE
AAA_22
DEAD
NAT10_TcmA_helicase
nSTAND3
UvrD-helicase
UvrD_C
AAA
AAA_29
NTPase_1
AAA_12
AAA_28
AAA_16
NPHP3_N
MeaB
RecD_N
TrwB_AAD_bind
RsgA_GTPase
HTH_Crp_2
HHH_2
ABC_tran
SRP54
FtsK_SpoIIIE
AAA_24
TsaE
Zeta_toxin
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WBY63468
LinkDB
All DBs
Position
complement(1149100..1151325)
Genome browser
AA seq
741 aa
AA seq
DB search
MQQKQLLEMTGTVESVIFRNDKNGYAVIELNNGEDLVVVVGTMPFVGVGEQLHVIGTWVN
NSTYGTQFKAQIIERRQPSDSGAMLKYLSSGAIRGIGPVMARKIVETFGENTAYVLENEP
ERIAEIKGITRSKALSISEEFRRVGGIRETMLRLANYGITPEEAVRVWKTFGPQAEEMVK
QDPYCLCGDGPQIDFFRADRIAASLEFPQDDRCRLRAGIVFVLKHNEGNGHTCLPADKLT
AATSKMLGVSLEKVSATLEELKADGSLVSRVIREREFLFTPRLYRAEVYIAGRIRMMLRF
PPQPVEGVEGYISTIEAEEGMEYADLQKKAIREALTRGMLILTGGPGTGKTTTLNAIIRI
LEFHGAKVLLAAPTGRAAKRMSELTGKEAKTIHRLLRVKWDENDRPEFEKNEKDLLDCDA
LILDELSMVDTPLFEAILRALPLGCRLIMVGDCDQLPSVGPGNVLGDLIASGLVPVVQLR
EIFRQSMKSLIVTNAHRIVAGQDPDLTVHTSDFFFLPYRSAAEIKSVIIDLCSRRLPNSY
GYSPFSDIQVLTPGRKGELGAAELNRSLQQAVNPPSPEKQELTVGGVLFREGDKVMQVKN
DYNLPWTREDGTCGEGVFNGDLGIIEKIDRRAAAFTVRMEDRVILYEKETAEELELAYAM
TVHKSQGNEFPAVVIPMFRVAPQLSYRNLLYTAVTRAKSLLILVGREDIVRQMVANDKKT
RRYTGLLDFLAGETENDEKNG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcagaaacagcttcttgaaatgaccggcaccgtggagtcggtcatttttcggaat
gacaaaaacggctatgccgtcatagaactcaacaacggagaagaccttgttgtggtcgtg
ggaaccatgccgttcgtcggagtcggcgagcagctccatgtgattggcacatgggtaaac
aattccacctatggaacccagtttaaggcacagataattgaacgccgtcagccgtcggat
tccggtgcgatgctgaaatatctgtcatccggggcaatccgcggaatcgggccggtcatg
gcgcggaaaattgtggagacgttcggggaaaacactgcgtatgtgctggaaaatgagccg
gaacgcatcgccgagattaaggggattacccgcagtaaagcgctgagcatttcggaggaa
ttccgccgtgtcggcgggattcgagaaaccatgctccggcttgccaactatggaattaca
ccggaggaagcggtgcgcgtttggaagacattcggcccgcaggcagaggaaatggtaaag
caggacccgtattgcctctgcggagatgggcctcagatcgattttttccgcgcagaccgc
attgcagcttcgctggaatttccgcaggacgaccggtgccgtctgcgcgcaggaattgtt
tttgtgctcaaacataacgagggcaacggccacacttgccttcctgcggacaagctcacg
gcagcgacctcaaaaatgctcggagtttctctggagaaggtttccgctaccttagaggaa
ctaaaagcagacggcagccttgtttcacgggtgattcgggaacgggagttcctgtttacg
ccccgcctgtaccgtgccgaagtgtatattgccgggcgcatccgcatgatgctccgcttt
ccgccgcagccggttgagggggtagaggggtatatctccaccattgaagcggaggaaggc
atggaatatgccgacctgcagaagaaagccatccgcgaagctttaacccgcggaatgttg
attctcaccggcggcccgggcaccggaaaaacaacaacgctcaatgccattatccgtatt
ctggagtttcatggagcgaaggttttgctcgcggcgccgacgggacgcgccgcaaagcgg
atgtccgagcttacgggcaaggaagcgaagacgattcaccggctgttgcgcgtgaaatgg
gatgaaaacgaccgccccgaattcgagaaaaacgaaaaagatctgttggactgcgacgca
ctgattcttgacgagctgtcaatggtggacacgccactctttgaagcgatcctaagggct
ttgccgctcggctgcagactgattatggtcggagactgcgaccagctgccctcggtcggt
ccgggcaacgtactcggcgacctgattgcttccggccttgtccccgtggtgcagctgcgt
gagattttccgtcagtccatgaaaagcctgattgttaccaatgcacaccgcattgtcgca
gggcaggatcccgacttgaccgtgcacacctcggattttttcttcctgccgtaccgttcc
gcagcggaaatcaaatccgtcatcattgacctgtgcagcaggcgcctgcccaacagctat
ggctattcgccgttttcggatattcaggtgctcacgcccgggcgaaaaggagagctcggt
gccgcagagctgaaccgcagcctgcagcaggcggtgaaccctccttctccggaaaagcag
gagttgaccgtaggaggcgtgcttttccgcgaaggggacaaggtcatgcaagtgaagaac
gactataaccttccgtggacgcgcgaagacggaacctgcggcgagggcgtgttcaacggc
gacctcggaatcattgaaaaaattgaccgcagggccgctgcattcacggtacgcatggaa
gaccgcgtcattctctacgaaaaggaaactgcggaggaactggaactagcctatgccatg
acggttcacaagagccaaggcaacgaatttccggcggtggtgattcccatgttccgcgtg
gcgccgcagctttcttaccgcaatctgctttacaccgccgtcacaagggctaaatcgctg
ctcattttagtggggcgggaagatatcgtccggcagatggtcgccaacgacaaaaagacc
agacgctacaccggccttcttgattttctagcgggggaaacagaaaacgatgaaaagaac
ggctga
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