Thermocaproicibacter melissae: NOG13_05725
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Entry
NOG13_05725 CDS
T09029
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel03030
DNA replication
tmel03430
Mismatch repair
tmel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NOG13_05725 (holA)
03430 Mismatch repair
NOG13_05725 (holA)
03440 Homologous recombination
NOG13_05725 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmel03032
]
NOG13_05725 (holA)
03400 DNA repair and recombination proteins [BR:
tmel03400
]
NOG13_05725 (holA)
Enzymes [BR:
tmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NOG13_05725 (holA)
DNA replication proteins [BR:
tmel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NOG13_05725 (holA)
DNA repair and recombination proteins [BR:
tmel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NOG13_05725 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
WBY63473
LinkDB
All DBs
Position
complement(1154719..1155771)
Genome browser
AA seq
350 aa
AA seq
DB search
MPEITEAELKKQIEKNNFAKLYFLYGEEKYMVEHYAQRLIAKASAEGLRDFNFQKFDGCE
ADMDSIAAAVEAMPVMAERKCVAVSDLDVGALRSTDAKKLEEILSDLPDTCVLVIYLLSF
NFDEKRDKTWKKFLTTANKIGVTVPFRRLSQAQIEKFICACAEKRGCTITRQNAARMLSL
CGTDLQTALNELEKLCAYTGSGEITAQTVDSMTVRNLEARVFDLSKAILAGASDRAYTIL
GQLFQQNEEPVSILAVLSGAYLDIYRVKASLQSGFSAQEPAKYFDYARKEFRLNNAAYEA
KRFSTPMIRQSLDALLEADVALKSSRGDRRLVLEELLAKLIWIAEKEKIA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaataaccgaagcggagctgaaaaagcaaattgaaaaaaataactttgccaag
ctgtactttctttacggcgaagaaaaatacatggtggagcattatgcccagcggctgatt
gccaaagcttccgcggaaggcctgcgcgacttcaattttcagaaattcgacggctgtgag
gcggatatggattccatcgctgcagcggtagaagcgatgcccgtcatggcggagcgaaaa
tgcgtggcagtctccgacctcgacgttggcgccctgcgaagcacagatgcgaaaaaactc
gaagaaattctttccgaccttcccgacacctgcgttctggtgatttaccttctctccttc
aattttgacgagaagcgcgataaaacttggaaaaagttcctcacgaccgccaataaaatc
ggggttacggttccgttccgccgcctttcgcaggcgcagatagaaaaattcatctgcgcc
tgcgcggaaaagcgcgggtgcacaataacccgccagaacgccgcgagaatgctttcactc
tgcggcacggatctgcaaaccgcgctgaacgaactcgaaaagctgtgcgcttacaccggc
agcggcgaaatcaccgcgcagacggtcgattccatgacggtccggaatctagaggcgcgt
gtctttgacctttccaaagcgattctcgcgggcgccagcgaccgtgcctatacgatcctc
ggtcagctttttcagcagaatgaagaaccggtttccatcttggcggtcctctcgggggcg
tatctcgatatctaccgtgtgaaggcttcgcttcagagcggattctccgcgcaggagccg
gcgaaatattttgactacgctcgcaaggagtttcgtctgaacaacgcggcatacgaagcg
aagcgcttttcaacgcccatgattcgccaaagccttgacgccttgctggaagccgatgtg
gcgctgaaaagctcgcgcggagaccgcaggctggtgctcgaggagctgctggcgaagctg
atttggattgcggaaaaggagaagatcgcttga
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