Thermocaproicibacter melissae: NOG13_06130
Help
Entry
NOG13_06130 CDS
T09029
Name
(GenBank) SH3 domain-containing protein
Organism
tmel
Thermocaproicibacter melissae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_3
SH3_4
Phage_lysozyme
SH3_16
SH3_1
GW
Big-like
DUF5992
HL_N-beta
DUF2793
DUF7141
Motif
Other DBs
NCBI-ProteinID:
WBY63548
LinkDB
All DBs
Position
complement(1244933..1247434)
Genome browser
AA seq
833 aa
AA seq
DB search
MQKTSRRFWRTSLAAVCAAVLLFTAVPLGSSVSAATTAKTTDYLNLRQGPGTNTKVILTL
IKNATVTILDNSDSQWAKVKTVSGYVGYCFKQYLSFSGSQNTSSSSSGITAKTTTALNMR
NGPSLGNGIITVLKTGTSLKVLDNSNRDWVKVQTSDGRSGWCYRQYLAISGAASSTSSNT
STSSSGSSLTAVTTDYLNLRTGAGLNYRVILTMKKGSTVTVLDNSNRSWVKVRTASGTQG
WCSRDYLKISSSTSSSSSSSSRSSSTTTSSSSSSKASSSSSSSTSSNSSSSASSGSTGST
STPSTPKLTGALVQVNDLLRLRSGPGTSYSVLGYLKNGTYLTVLEPPKNSWMKVKWGSTI
GYVCTDYVKFLYDGDTGSSNSISISTTSAKIPQGKTLWIKASGSATWTSSNTKVATVQNG
YVLAVAPGTAVITAASGSAKAVCNVTVTEAEPVRAAYASPNIAAPGSAVTFTAVTDTQRD
GVRFLVTMQNGSVRTLQASLSATNTTNGVTTKVWTASTKFDTAGVYSFTAVSSVKGVYSS
GGVASDVMVATQGDPEVSTNESRRASDQLINMIASWEGYSATVYADKLTYNSIPTIGYGF
TLSSNAVFYNNLSKPEAWAQLVNTVNHGSYTTELNRMIAANNFKMNQNQADALISFAYNV
GAGYFNSSQEMDFRRIMKNAVVPPEIPSSGLGAKVTYSTSMRQNHTFNSNPICSGVSNGT
SVTVMDVWKEKKNDVWYKVRLSNGETGWLNAGYVNFNNSDKMEHDLNYTNATAFGSELIL
WNQAGGNFVAGLFYRCLNEANIYNYGDFKNDRSYLLSNPYGYTFPKSASVLTG
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaaaacatcgcgccgcttttggcggacttcgttagcggcagtttgtgcagccgtt
cttttgtttacggctgttccgctcgggagcagcgtgtccgcggccacaacggcaaaaaca
acagattacctcaatttaagacaggggccgggtaccaatacaaaggtcattctgactctg
attaaaaatgccacggtaacgattctggataattcggacagccagtgggcgaaggttaag
actgtcagcgggtatgtcggatactgctttaagcagtatctgagcttttcgggcagtcag
aacacttcgtcatcttcttccggaatcactgctaaaacgacaacggctttgaacatgcga
aacggcccgtccctcggcaacgggattattaccgttctcaagaccggtacttcgttgaag
gtgcttgataattccaaccgcgactgggtgaaggttcagacttccgacggaaggagcggt
tggtgctaccgccagtacctggcaatttcaggtgctgcaagttccacaagctcaaatact
tcaacttcttcctccggctcatctttgaccgcggtaacaacggattacttgaatctccgc
accggtgcagggttgaattaccgtgttattctgacgatgaagaaaggttccaccgtcacg
gtgcttgataattccaaccggtcttgggtaaaggttcgcacagcgagcggaacacagggc
tggtgcagcagggattatctgaagatttcaagttccacatcttcatcatcctcgtcatca
tctcgttcttcaagtaccacaacttcttccagcagttcctccaaagcttctagctcttct
agttcttccacttcttccaactccagttcttccgcctcttccggttcaacagggagcacg
agcactccttccactccgaagctgacgggtgcgctcgtgcaggttaacgatttgctgcgg
cttcgttccggaccaggcacatcttacagtgtgcttggatacctgaaaaatggtacatat
cttaccgtacttgagccaccgaagaatagctggatgaaggtgaaatggggaagcacaatc
ggatatgtctgcacggactatgtgaagtttctttatgacggcgatacaggttccagcaat
tccatttcgatttccacgacttctgcaaaaattccgcagggcaaaacgctttggattaag
gcttccggctccgctacctggacaagcagcaacaccaaagttgcaaccgtccagaacgga
tatgttctggctgtcgcgcccggaacagcggtgattaccgccgcttccggttctgcaaaa
gctgtctgcaatgttacagtcactgaggcagaacctgtccgcgctgcttatgcgtccccg
aatattgcggcaccgggcagcgccgtaacgtttaccgcagttaccgatacgcagcgtgac
ggtgtcaggttcctcgttacgatgcaaaacggaagtgtgcggacgctgcaggcttctctc
tcagcaacaaacaccacaaatggcgttacgacaaaagtttggacggcttctaccaagttt
gatactgccggcgtgtactcctttacggcggtttcttccgtcaaaggcgtttacagttcc
ggcggcgtcgcttccgatgtgatggtagctacacagggcgacccagaggtttccacgaac
gaatcccgccgcgcttccgatcaacttatcaacatgatcgctagctgggaagggtacagc
gctacggtttatgccgataaacttacctacaacagcattccgacaatcggctacggcttt
acactcagctccaacgcggttttctacaacaatctcagtaagccggaggcttgggctcag
ttggtgaacacggttaaccacggttcttacactacagaactgaaccggatgattgccgcg
aataatttcaaaatgaatcagaatcaggccgatgccttgattagctttgcttataacgtc
ggcgcgggatatttcaactcttcgcaagagatggatttccgcaggattatgaaaaatgcg
gttgtaccgcccgaaattccatcgtcaggattaggcgcgaaggttacatacagcacatcc
atgcgccaaaaccatacgttcaattccaacccaatttgcagcggcgtttccaacggcacg
tccgtaacggtaatggatgtctggaaagaaaagaagaatgatgtctggtataaggttcgc
ctttcaaacggggagaccggttggctgaatgcaggctatgtcaatttcaataattcggat
aaaatggaacatgacctgaattacaccaatgcaacggccttcggttccgaattgattttg
tggaatcaggcaggaggaaacttcgttgcggggcttttctaccgctgcctgaatgaagcg
aacatttacaactacggagatttcaagaacgacagaagttaccttctcagcaatccgtat
ggatatacattcccgaaatccgcttccgtccttacaggctga
DBGET
integrated database retrieval system
