Thermocaproicibacter melissae: NOG13_07405
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Entry
NOG13_07405 CDS
T09029
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NOG13_07405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmel03400
]
NOG13_07405
Enzymes [BR:
tmel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NOG13_07405
DNA repair and recombination proteins [BR:
tmel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NOG13_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WBY63788
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All DBs
Position
1509307..1510059
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AA seq
250 aa
AA seq
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MKLISWNVNGLRACMNKGFADFFNASEADIFCIQETKMHPEQADISFDGYQSFWNSAEKK
GYSGTAVFTRIEPLSVRYDLGPAEFSGEGRVITLEFNSFFLVNVYTPNSQRELTRLQYRM
SWDDAFREYVTALDHRKPVVICGDMNVARSEIDLKNPKQNVGNAGFTNEEQQKIEQLLDT
GFVDTFRLLYPEKTGAYTWWSYLFHARAHNAGWRIDYFLVSNRLSEHVQDSLIFSDITGS
DHCPVGLILA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatttcatggaatgtaaacggccttcgcgcctgcatgaacaaaggcttcgcc
gacttttttaacgcaagcgaagcagatattttctgcattcaggagacaaagatgcaccct
gaacaggcagatatttcttttgacggataccaatctttctggaacagcgccgaaaagaag
ggctattccggaaccgctgtttttacacgcatagagcctctttccgtccgttatgacctc
ggccctgcggagttttccggagaaggccgcgttatcacgctggaattcaattcgttcttt
ctggtgaacgtctatacgccaaactcccagagagagctgacacgcctgcaataccgtatg
tcgtgggacgatgcgttccgcgaatatgtaactgctttggaccatcgcaagcctgtggtg
atttgcggcgacatgaacgtcgcccgcagcgaaattgacctgaaaaacccgaagcaaaac
gtagggaacgccggctttaccaacgaagaacagcagaaaatcgagcagcttctggatacc
ggatttgtcgacacctttcgccttctctatcccgaaaagacaggtgcctacacgtggtgg
tcctacctttttcatgcgcgtgcccataacgccggatggcgcatcgactattttctcgtc
tccaaccgcctttcagagcacgtgcaggacagcctgattttttccgacatcaccggcagc
gatcactgccccgtcggactgattcttgcgtaa
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