Talaromyces marneffei: EYB26_000414
Help
Entry
EYB26_000414 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tmf
Talaromyces marneffei
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmf03009
]
EYB26_000414
Enzymes [BR:
tmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EYB26_000414
Ribosome biogenesis [BR:
tmf03009
]
Eukaryotic type
Pre-60S particles
Helicases
EYB26_000414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
79160387
NCBI-ProteinID:
XP_054115705
LinkDB
All DBs
Position
1:join(1139593..1139879,1139937..1140446,1140500..1141610)
Genome browser
AA seq
635 aa
AA seq
DB search
MAPKSRGSAGRLWENLDPPLSEWILEAMSTMGFARMTPVQASAIPLFMSHKDVVVEAVTG
SGKTLSFLIPIVEKLLRLDEPIKKHHIGSIIVAPTRELASQIYNVLLSLLEFHGPSASVI
KPADETEEGVKKYPSSTLKVIPQLLLGGTTTPAEDLSQFLKRSPNVLVGTPGRLLELLSS
PHVHCPQSSFEMLVFDEADRLLDLGFKDDISKILGRLPKQRRTGLFSASVSEALDQIIRV
GLRNPVKIAVKVRGASGVEEKRTPASLQMTYLVTPPTHKLPAVKNILDVLEPRPQKTILY
FSTCAGVDYFQYIIPLILGNEFTVIPLHGKHPANVRQKNFTRFTNSVTPTVLLTTDVAAR
GLDIPSVDLVIQIDPPSDPKAFIHRCGRAGRAGRRGLSIVLLSPGCEEDYVPFLEVRKTP
VTLYENPAFKTTDEDARHVTEIARKAVLSDRSYHDKAQKAFVSWLRSYSKHQASSIFRIA
DLDWEALGHAWGLLKLPKMPELRNFKGDKFLGVTLDWDNYAYADKQREKHRLEALKEYEA
SKLDENSKKRPAGESVPWSQNLEKRKEREQRRERKRARRDRERWDKMTEEERQKVRETEA
MVENLRKEAAKRREAAKAAQDMEADGGEDEFKGFD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcacctaaatcgcgagggtcagccggcaggttatgggaaaatctcgatccaccactg
tcagaatggattctcgaagcaatgtcgacaatgggtttcgcccgcatgaccccagtacaa
gcatctgctattccactctttatgagccataaagatgtggtggtagaagctgtgacaggt
agtggaaagaccttgtcttttttgataccaattgtggaaaaattgctgcggttggatgag
cccattaagaaacatcatattgggtctatcattgttgctccaacgagagaattggcgtct
caaatctataatgttctcctatccctcttggagttccatggcccctccgcatccgttatc
aaaccagccgatgagacagaggaaggcgtcaaaaaatacccatcttcgacactaaaagtc
atcccacaacttctcctaggcggcacgacaacacctgccgaagatttgagccaatttttg
aaaaggtcgccaaatgtccttgttggaacacccggcagactgctcgagcttctttcgtca
ccacacgtacactgccctcaatcctcattcgaaatgctggtatttgatgaagccgatcga
ttgttggatcttggtttcaaggatgatatttcgaaaatacttgggagacttccgaaacag
aggcgaacaggtttgtttagtgccagtgtgagcgaggctctggatcagatcattcgagta
ggcttgcggaaccctgtcaagattgcagtgaaagtgcgcggggcatctggagtggaagag
aagcgtactcctgctagtttacaaatgacatatcttgtcacacctcctacacacaaactt
cccgccgtcaaaaacatcctcgacgtattggaacctcggccacaaaagactattttatat
ttctcgacatgtgcaggtgtcgactacttccaatatataataccattaattctcggcaac
gagtttaccgtcataccgcttcatgggaaacacccagccaatgtgcggcaaaagaacttt
actcgcttcaccaattctgtcacacctactgtactcctaaccaccgatgttgcggcacgt
ggattagatatcccatctgttgacctcgtcattcagatagaccctccatccgacccgaaa
gctttcattcaccgctgcggacgagctggtagagcgggtcgtcggggactgagtatcgta
cttctctcaccaggctgtgaagaagattatgttccatttctcgaggtgcgaaagacgcca
gttactttatatgaaaatccggcatttaaaaccactgatgaagatgcccgccatgtaacg
gagatagcccgaaaggcagtactttcagacaggtcgtaccatgacaaagctcaaaaggca
tttgtcagctggcttcgaagctacagcaagcaccaagccagcagtatcttccgtattgct
gacttggattgggaggcattgggtcatgcctggggtttattaaaattgcccaagatgcct
gaattaaggaatttcaagggggataagtttctcggtgtgacacttgactgggataattat
gcatatgcggataagcagagagaaaaacatcgtctggaagctctaaaggaatacgaagca
tcgaaattagatgaaaattccaagaagcgacctgcgggtgaaagtgtaccatggagccag
aacctcgagaagaggaaagagagggaacagcggcgagagaggaaacgagcacggcgtgac
agggaaagatgggataagatgaccgaagaagagagacaaaaagttcgtgagaccgaggca
atggttgaaaatttgcgaaaggaggccgcgaaacgacgagaggctgccaaggcagcgcaa
gatatggaggcagatgggggcgaagacgaattcaagggtttcgattaa
DBGET
integrated database retrieval system
