Talaromyces marneffei: EYB26_000647
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Entry
EYB26_000647 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03013
Nucleocytoplasmic transport
tmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EYB26_000647
03015 mRNA surveillance pathway
EYB26_000647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_000647
Enzymes [BR:
tmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EYB26_000647
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
EYB26_000647
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
79160620
NCBI-ProteinID:
XP_054115938
LinkDB
All DBs
Position
1:complement(join(1732860..1733138,1733191..1733391,1733446..1733683,1733739..1734233,1734292..1734451,1734515..1734584))
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AA seq
480 aa
AA seq
DB search
MASENNEGKSLADRITKPGADSTDASLSAANKDGASEPLGGSNLQEPEYDVEVKLSDLQA
DPNNPLFSVKSFEDLGLSPSILQGLYAMKFLKPSKIQERALPLLMHNPPTNMIGQSQSGT
GKTAAFTLNILSRIDLSSEEMRKSPQALVLAPSRELARQIGGVITEMGRFVEGLSVGMAV
PTEGKRPARLEHPVVCGTPGTVMDLIKKRIMIVNKLKVLVLDEADNMLDQQGLGDQCIRV
KGFLPKTVQVVLFSATFDDQIRLYAAKFAPNANEISLKQEELTVEGIRQFYLDCVDDNDK
YNVLVKFYGLLTVASSIIFVQTRQTAAEIEKRMTAEGHTVASLTGGVEGSVRDKIIDDFR
EGRAKVLITTNVLARGIDVSTVSMVINYDIPEHHKPGHPRTADPQTYLHRIGRTGRFGRV
GVAISFVSNKEEWQMLMSISKFFNTNIEGIQTRDWDEVEELVKKIIKNPRARGDFPQSTA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaaaacaacgagggcaagtctcttgcagaccgtatcaccaagccaggtgca
gactctaccgacgcatctttgagtgctgccaacaaagatggcgcaagcgagcctcttgga
ggcagtaatcttcaagaaccagaatacgatgtggaggtcaaattaagcgacttgcaggcc
gaccccaacaatccgctcttctctgtcaaatccttcgaagatctaggcctgtcaccaagt
attcttcaaggtctctacgcaatgaagtttttgaagccgtccaaaattcaggagcgcgcc
ctacctctccttatgcacaacccccctacaaacatgatcggacagtcgcagtcaggaact
ggaaagacagcagccttcaccctcaatatcctgagtcgtattgaccttagctcggaagaa
atgcgaaaatcaccacaggctttggttcttgcgcccagtcgcgagctggctcgtcagatt
ggaggcgtcataactgaaatgggacgattcgtggagggtttgtctgttggaatggcagtg
cccacagaaggcaaacggcctgcgcgtttagaacatccagtcgtttgtggaacgcccggt
acggtgatggatctcataaagaagcgaatcatgattgtgaacaaactgaaggttcttgtt
cttgacgaggccgataacatgcttgatcaacaaggattgggagatcaatgtatccgtgtc
aagggtttcctcccaaagaccgtacaagtcgtgctcttctctgccacgttcgacgaccaa
atccgtctatacgcggccaaattcgctccaaatgcaaacgaaatttcactcaaacaagaa
gagctcactgtcgagggaatcagacaattctaccttgattgtgtcgatgataatgacaaa
tacaatgtgcttgtcaagttctatgggcttctcacggttgcatcctcaattatcttcgtc
cagactcgtcaaactgctgccgagattgagaagcgcatgaccgcagagggtcataccgtg
gcatcattgaccggtggtgtcgagggctccgtacgtgacaaaatcattgatgatttccgt
gagggtcgcgctaaagtgctcatcaccaccaacgtccttgcccgtggtatcgacgtttca
actgtttcgatggttatcaactacgatatccctgaacatcataaacctggccacccacgc
acagcagacccccagacatatctccaccgtatcggtcgtacaggccgatttggacgtgtc
ggtgtagccatttccttcgtctccaataaggaagagtggcagatgttgatgagcatttca
aaattcttcaacaccaatattgaaggcatccaaactcgtgactgggatgaagtcgaggaa
ctggtgaagaagatcatcaagaatcctcgggctcgaggagactttccccagtctacagct
tga
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