Talaromyces marneffei: EYB26_000774
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Entry
EYB26_000774 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
tmf
Talaromyces marneffei
Pathway
tmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EYB26_000774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_000774
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
EYB26_000774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
UTP6_C
HAT
Motif
Other DBs
NCBI-GeneID:
79160747
NCBI-ProteinID:
XP_054116064
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All DBs
Position
1:complement(join(2076178..2076842,2076904..2077909,2077967..2078398,2078454..2079400,2079479..2079533,2079734..2079745))
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AA seq
1038 aa
AA seq
DB search
MSRDCTCWSTPLAATVNPHYIPGLVVDPRVSYLECALRRSIMAEEDAEQAFFQAQAMSNE
YDPAGVAQTVEASDSEEDYDPSNTLHDEYSVTVAESNPNDAITESNDASSATQSIPQDTY
QPDQADTSQTSQPPSRPDSQNSVLGPSSAMNVQPKTKTIGGFVVDDDEDEEDDEREDEDK
DEAEYEPPGVLETIEHGGHISAGASEQLPFSEKNANETISTSGVSIQPLVPEMASSKDVS
NNPVSFHSGHNLYTEAMQQVGDNTDSNAPTPIPLAANSAASRSRLPHDRIGLLEDRIRED
PRGDINAWIELIAEHRSRNRLDNAREVYERFFKVFPSCAEQWVAYIQMESENNELQRLEQ
IFNRTLLSIPNVQLWTAYLDYIRRRHPLTTDTSGQARRTITSAYDLALTHVGLDREAASL
WTDYVEFIKTGPGVVGGTNWQDQQKMDLLRKAYQRAICVPTHSLNTLWKEYDQFEMGLNK
LTGRKFLQDRSPAYMTARSSYTELQNLTRDLDRTTLPRMPPAPGFEGDVEFQQQVGIWRR
WFNWEKGDPLVLKEEDIAAYKNRVLYAYKQALMALRFVPDIWFEAADFCFQNGMDAEGNE
LLIQGLEANPESCLLAFKRADRLEIESESEQDPQKRGAKVREVFDKLLDALYALNTKARE
REEQDISRIKEQFANESDDYQPVADDEDELGRSQEVQAKEAAKESQIEAMRKAHATQITM
TSKLISFAWIALMRAMRRIQGKGKPGELAGSRQVFAEARKRGRITSDVYIASALIEYHCY
KDPAATRIFERGARLFPDDENFALEYLKHLFDINDVTNARAVFEMTIRRLTSKPENVIKT
KPIFAFLHDYESRYGDLGQVISLENRMRELFPDDPTLSQFAHRYSDANFNPVSAQPVISL
SQVRPRTVPLIDQQQQGSIQGTPTQYLDVPPTGSPKRPFPLDDFEEDRPRKFARAESPLK
GIPARRPDQLKRPTTQVNGGQYRPQPSAAPLPRDVVHLLSIIPPASAYNAGRFSAEKLVD
LIRRIDIPSSSTSQFRQY
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgattgtacctgctggagcaccccactagctgcaaccgtcaatccacattac
attcctggactagttgttgatccccgcgtttcgtaccttgagtgcgcactgcgccgctca
atcatggccgaggaagacgccgaacaggcgtttttccaggcgcaagccatgagcaacgaa
tatgatcctgccggagttgcgcaaaccgtcgaagcatctgattcagaagaagattatgat
ccatcgaataccttacatgatgagtactcagttacagtagcagaatctaatccaaatgac
gcgattactgaaagcaatgatgcttcttctgctactcagtctatcccacaggatacttat
cagcctgaccaagctgatacttcacaaacatctcagcctccgtccagacctgactcgcaa
aactccgtattagggccttcgtccgctatgaatgtacagccgaaaaccaagaccataggt
ggctttgttgttgatgacgatgaagacgaggaagatgatgagagagaggatgaggacaag
gatgaggcagagtatgagccaccaggagttttggaaactattgaacatggtggacatatt
tctgcaggcgcttctgagcagcttcctttttctgaaaaaaatgcaaatgaaactatttct
acgtctggtgtatcaatacaaccccttgtgcctgagatggccagttccaaagatgtttct
aataatcccgtttctttccattctggtcacaatctgtacactgaagcgatgcaacaagtt
ggagacaatactgatagcaatgcacccaccccaattcccttggcggcaaattctgcggcg
tctcggagtcgcctacctcatgatcgcattggcctgttggaagatagaatcagagaggat
cctcgtggagacataaatgcatggatcgaactgatagccgagcaccgaagtcgtaacaga
ctcgacaacgcgcgagaagtgtatgagcggttcttcaaagtttttccatcttgtgctgag
caatgggtagcatatatccagatggaatccgagaacaatgagcttcaacgccttgagcag
atcttcaatcgtacattgctaagcatccccaatgtgcaattatggactgcatacttggat
tacattcgccgaaggcatcctctgactacagacacatccggccaggctaggcgaactatc
acgtctgcatatgacttggccctcactcatgtcggtttggatagggaggcggcatcattg
tggacagattatgttgaattcataaaaacaggacctggtgtcgttggtggtacgaattgg
caggaccagcaaaagatggatttattacgaaaagcctatcaaagggctatctgtgttcct
actcattccttgaataccctctggaaggagtacgatcaatttgagatgggattgaacaaa
cttacgggacgcaaatttttgcaagatcggtctcctgcatatatgacagctagaagttct
tatactgagttgcagaacttgacccgagaccttgatcgcacaacgcttccaagaatgccc
ccagcccctggatttgagggagatgtcgagtttcagcaacaagtcggaatatggcgccga
tggttcaattgggaaaagggcgaccctctagtcctcaaagaagaagacatagccgcgtac
aagaacagagtgctgtacgcctacaagcaagcattgatggccctgcgatttgtcccggat
atttggtttgaagctgcagacttttgtttccaaaacggcatggatgctgaagggaacgag
ttgctcatccaaggcttagaggcaaatccagagagctgtttgcttgcatttaaacgtgct
gatagattggaaatcgaatctgaatcggaacaagatcctcaaaaacgtggtgcgaaagtc
agagaagtctttgacaaacttttggatgctctgtatgctttgaataccaaagcccgagag
cgagaagaacaagacatttccagaatcaaagagcaatttgctaacgagtcagacgattac
caacccgttgctgatgacgaagatgagttgggacgctcacaggaggtccaggccaaagaa
gcagcaaaggagagtcaaatcgaggccatgcggaaggcacatgcaacacaaatcactatg
acttccaagttgatctcgtttgcttggatagctttgatgcgtgcgatgcgccgtattcag
ggcaagggtaaacccggagaacttgctggttccagacaggtgtttgccgaagctcgcaag
cgcggtcgtatcacgagtgatgtgtacattgccagtgccttgattgaatatcattgctat
aaggatccggccgcaacaagaatttttgaacgaggtgctaggttatttccggacgatgaa
aattttgcgcttgaatatctgaagcatctgtttgacatcaatgatgttaccaatgctcga
gcagtctttgaaatgactataagaagactaaccagcaaacctgaaaatgtcatcaagacc
aagcccatctttgcgtttctgcatgattatgaatcccgatatggcgatcttgggcaagtc
atcagtctggaaaaccgcatgcgcgaactttttcccgacgaccctactctttctcaattc
gcacatcgttattcggatgccaacttcaatccagtttcggcacaaccggtcatctcacta
tcacaagtccgtccccgaacagtacccttgattgatcagcaacaacaaggctcgattcaa
ggaacgcctacacaatacctcgatgtgcctcctactggctcacccaaacggcccttccca
ttagatgatttcgaagaagatagacctcgaaagttcgctcgtgccgaatcccccttgaag
ggcataccagcgcgtcgaccggatcaactgaaacggcccaccacccaggtcaatggcgga
caatatcgtcctcaaccttcagcagccccgctaccgcgtgatgtcgttcatctcctcagc
attatcccgcctgcttccgcgtacaacgctggacgattctctgcggagaagctggtggat
ctgattcgcaggatagatatcccatcttcatctacatcgcagtttcgacaatattaa
DBGET
integrated database retrieval system
