Talaromyces marneffei: EYB26_001184
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Entry
EYB26_001184 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K14315
nucleoporin NDC1
Organism
tmf
Talaromyces marneffei
Pathway
tmf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EYB26_001184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_001184
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EYB26_001184
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
79161157
NCBI-ProteinID:
XP_054116470
LinkDB
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Position
1:complement(join(3167332..3168919,3168970..3169237,3169292..3169424))
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AA seq
662 aa
AA seq
DB search
MAAPPPRPYRRILTSALHRRFVHASAVTLLVDYLVSFIIGTKTSFLWSWFPLGVCGLRAL
LLFISTLAVFFIRVAQMHVGPRTTASPLAALRNVFPLQVLQTLGWYLFSAWWFSEIYLWS
APEEADLGWVKLSRPNSRPILNERSIYLHTYHMILAIAQTAIHLYYDYDRLPIPVAKRTS
KDDRTHPMEPTFKRLQYGVIGSVIDALRNGFIVTLASPFIYVMFLRRPAWNFSLYFAKLF
WNFSRTAAEPQGAVPPAFYTLFFRQIVSGGCLVFLWQTANLFFTVFLTQEPLKRGQPLTN
DSKDPTGSLINGLKAKKDIAKNFAFWELCFISQRFPDRRKAIFEDLDRANGQAWKQVLQA
SIDTIEGVSGRINKFKTPPATKLSKDANVAYPQIQTLPRLTEGPKQDNIFAPSPKASGFG
ESFGATAKSFGQSKDWTPAARAKAKEAFTQASDALLSPERRKKLLGAPDDVKLLTGPTGT
SKSSFNYSSIPFVSQFLRSPIGKPFRQTYAQRLRNIVFGEPYGQVACVIDAIESITRLLI
ASLKEDSFGQVSNDVPTIVRLYTSTIIALEDFVREDSGLGIHWSDVTFPSADSSPEVRRK
AREVPEVDTLLYMLRTSLSELLTSFEQYSRDVGLQAKDIRLAKAAAGLVGDDNNDNDDPF
TS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccacctccaaggccgtataggcgaatcttgacctctgcattacaccgcaga
ttcgtccatgcatcggctgtgacattgttggtggactatttggtttcttttatcatcggc
acaaaaacgtcatttctttggtcatggttccctctaggagtatgcggtctgcgcgctctc
ctcttatttatttcgacattggccgttttttttattcgagttgcgcaaatgcacgttggt
cctcgaactacagcttcacctctggctgccttgcgaaatgtattcccgctacaggtcctg
caaactctaggatggtatcttttctctgcctggtggttcagtgagatatatctctggtcg
gctcccgaagaggctgacttgggatgggtgaaactcagtcgacccaatagtcgaccgatt
ctgaacgaaagatccatttacttgcacacgtatcacatgatactggcaatcgcccaaacg
gctatccacctgtactacgactacgatcgtcttcctatcccggttgccaaacgcacctca
aaggatgaccgtacacaccccatggaaccgactttcaagaggctacaatacggcgttatt
ggaagcgtgattgatgctttgcgaaatggatttattgtcactttggctagtccattcatc
tatgtcatgttcctacgacgcccggcatggaacttctctctttactttgcaaagctattc
tggaacttttcgcggacagcggcagagcctcagggagctgtgcctcctgccttttacacg
ctattcttccgtcagattgtttcaggaggatgtcttgtctttctgtggcagactgccaac
ttgttcttcacggtcttccttactcaagaaccattgaagcgaggacagccacttaccaac
gattccaaggatcccacaggaagtttgatcaacggtcttaaagccaagaaagatatcgcc
aagaattttgcattttgggaactctgcttcattagtcagcgtttccccgatcgccgtaaa
gcaatttttgaggacctcgatcgtgccaatggacaagcctggaagcaagttctacaagct
tcaattgatacaattgagggcgtcagtggacgtatcaacaaattcaaaacaccacctgcg
acgaaactttccaaggatgccaacgtcgcatatcctcaaatccagactttacctcgattg
accgagggtcctaaacaagacaacatattcgcaccatcgcccaaggcaagcggatttgga
gaatcttttggagcgacagcaaagtctttcggacagtcaaaagattggacacccgctgct
agagccaaagccaaagaagcgtttacccaagcatcggatgcgttattgagccctgagcgt
aggaaaaagctgctaggtgcgccagacgatgtaaaattgcttactgggccaactggaacc
tccaagtcatctttcaactactcttccatcccatttgtctcacagttccttcgatcgccg
ataggtaagcccttcaggcaaacctatgcccaacgtttgcgaaacattgttttcggcgaa
ccctacggtcaagtcgcctgtgtcatcgacgcgatcgaatcgataacccgacttctcatt
gccagtttgaaagaagattcattcggccaagtgtctaacgatgtaccaaccatcgtccgc
ctctacacctcaaccatcatcgcactagaagatttcgtccgcgaagacagcggactcggc
attcactggtccgacgtcacattcccatcagctgacagcagccctgaagtacgaaggaag
gctagagaagttcccgaagttgacactctgctgtatatgctcaggacatctctttctgaa
cttctcacctcatttgagcagtacagtcgagatgtgggcttgcaagcgaaggatatcaga
cttgcaaaagcggcagctggattggtgggtgacgacaataacgataatgacgatcctttc
acctcctag
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