Talaromyces marneffei: EYB26_001539
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Entry
EYB26_001539 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EYB26_001539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmf03041
]
EYB26_001539
03009 Ribosome biogenesis [BR:
tmf03009
]
EYB26_001539
Enzymes [BR:
tmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EYB26_001539
Spliceosome [BR:
tmf03041
]
Complex A
U2 snRNP components
U2 related factors
EYB26_001539
Complex B
EYB26_001539
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
EYB26_001539
Ribosome biogenesis [BR:
tmf03009
]
Eukaryotic type
90S particles
Helicases
EYB26_001539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
T2SSE
AAA_7
nSTAND3
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
79161512
NCBI-ProteinID:
XP_054116824
LinkDB
All DBs
Position
1:join(4166384..4168546,4168603..4168719)
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AA seq
759 aa
AA seq
DB search
MGDRRPDSTDGSRAKRQKKDTAEMDPRNNPYLAHMYPEQNGDGDSSSGAFAKFKRHQTTA
ALAQEAEDADINPFSNRPFSSTYFSILKTRRNLPVHAQRDEFLQLYQKSQILVFVGETGS
GKTTQIPQFVLWDDLPQTQNRMVACTQPRRVAAMSVAQRVAAEMDVKLGEEVGYSIRFED
MTSPKTVLKYMTDGMLLREAMNDHNLQRYSTIILDEAHERTMATDILMGLLKEVVQRRPD
LKIIIMSATLDAQKFQRYFNDAPLLAVPGRTYPVEIFYTPEPEQDYVEAAIRTVLQIHAT
EPEGDILLFLTGEEEIEDAVRKISLEADEMTREADAGPMKVYALYGSLPPHMQQRIFEPA
PGPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK
ASAQQRAGRAGRTRPGKCFRLYTEGAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLV
HFDLMDPPAPETLMRALEELNYLACLDDDGNLTQLGRLASEFPLDPALAVMLVTSPEFYC
SNEILSITALLSVPQVFVRPHAQRKRADEMKNLFAHPDGDHLTLLNVYHAFKSADAQQDP
KQWCHDHFLSLRSLQSADNVRMQLQRIMEREEIDLVSTPFEDKKYYENIRRALVAGFFMQ
VAKKESTGKSMYITVKDNQHVLLHPSTVLSHDAEWVLYNEFVLTTKNYIRTITAVKPEWL
LEISPMYYDISSFPKGDIRSALLRASERLARKERMRAGR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatagacgtcctgattcgacagacggttcgcgtgcgaagcggcagaagaaggat
accgctgaaatggatccccgcaacaacccatatctcgctcatatgtatccagagcagaat
ggagacggagactcaagtagcggcgcttttgcaaagttcaaaagacaccaaactaccgct
gcgctcgcccaggaagctgaagatgcagacatcaaccctttcagcaatcgtcccttctca
agcacctacttttccatcctgaagactcgccgaaacttgcctgtccatgcacagagagat
gaattcctccagctctaccagaagtcgcaaatccttgttttcgttggtgagaccggttcc
ggaaagacaacgcaaatccctcagttcgtgctctgggacgaccttccacaaacccaaaac
aggatggtcgcctgtacccaaccgcgtcgagttgctgcgatgtctgttgcacagcgtgtg
gccgctgaaatggacgtgaagttgggcgaggaggttggttatagcattcgtttcgaggat
atgaccagcccgaagacggttctcaagtacatgaccgatggtatgcttctccgagaggct
atgaacgaccacaacctccagcgttacagcacgattattcttgacgaagctcacgaacgt
actatggcgaccgatatattgatgggattgctgaaggaagtagtgcaacggaggccagat
ttgaaaatcatcatcatgtccgctactttggatgcgcaaaagttccagcgctatttcaat
gatgcgccattgcttgcagttccaggaagaacttaccctgtagagattttctacacgcct
gagccggaacaagactacgttgaagccgccattcgaacggtattgcaaattcatgctacc
gaaccggaaggagatatcttgttgtttttgaccggtgaagaagaaatcgaagatgcagtc
agaaaaatatccctcgaagcagacgaaatgacgagagaagccgatgcaggtcccatgaag
gtttatgcgctgtatggtagtttaccgccgcacatgcaacaacgtattttcgagcccgcc
cctggtcctcgcagacctggtggacgccctggtcgtaaggttattgtttccaccaatatt
gccgaaacatctcttaccattgacggtatcgtctatgtcgtggacccgggattctccaaa
caaaaagtctacaaccctcgtatccgagtcgagtctcttttggtatcgcccatctctaaa
gcatccgcccagcagagagctggtcgtgccggtcgtacacgtccaggaaaatgcttccgt
ttgtatacagagggtgcgttcaagaaggagcttatcgaccagacatacccggaaattctt
cgatccaatctttcttccactgttctcgagctcaaaaagctcggtatcgacgacttagtg
cattttgacctaatggaccctcctgcaccggaaactttgatgagagctttggaagagctc
aactacttagcatgccttgatgacgacggtaatttgacacaattgggtcgtttggcatcc
gagttccctcttgatccagcacttgctgtgatgttggttacttctccagagttctactgc
tccaacgaaatattgtctataaccgctctactttcggtgcctcaagtttttgtgcgccca
cacgcacaaagaaaacgcgccgatgagatgaagaatctctttgcccatccagatggcgac
catctcacactcctgaacgtgtaccacgctttcaagagcgctgatgcccaacaagacccg
aaacaatggtgtcacgaccatttcctctctctacgatctctccaatccgcagataacgtg
cgcatgcaactgcaacgtatcatggaacgggaagaaattgatctcgtatccactccattc
gaggataagaaatactacgagaatatccgccgtgctctcgtcgctggattcttcatgcaa
gtcgccaagaaagaaagtacgggaaagagcatgtacatcactgtgaaggataaccaacat
gtcctcttgcatccaagcacggttctcagccatgatgccgagtgggtgctttataatgaa
tttgtgctcacgacgaagaattacattcggactattactgcggtgaaacctgagtggctc
ttggaaatttcacctatgtactacgacatttcgagtttccccaagggagatattcgctct
gctcttttacgtgccagtgagagacttgcgcgcaaggagaggatgcgagccggtcggtag
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