Talaromyces marneffei: EYB26_001566
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Entry
EYB26_001566 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tmf
Talaromyces marneffei
Pathway
tmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EYB26_001566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_001566
03041 Spliceosome [BR:
tmf03041
]
EYB26_001566
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
EYB26_001566
Spliceosome [BR:
tmf03041
]
Complex B
Other components
Prp19-related factors
EYB26_001566
Complex C
EYB26_001566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
Mad3_BUB1_I
TPR_15
DEP
NRDE-2
Motif
Other DBs
NCBI-GeneID:
79161539
NCBI-ProteinID:
XP_054116851
LinkDB
All DBs
Position
1:complement(join(4262459..4262735,4262793..4264804,4264864..4264917,4264968..4265084,4265140..4265229))
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AA seq
849 aa
AA seq
DB search
MPGALLPPRSQRHHAQMERTSAAEPDLYLISSEDTIYEQDLLRDPGSIKPWLSYIEYKRQ
NGTLYEQSFIMERACKQLPRSYKLWKMYLEFRINHLRGRNSAIHRAEYQKVNALFERALV
LLNKMPRIWEMFLSFLLKQPLVTYTRRSFDRALRALPITQHGRIWKLYKSFANSVSGFTA
VQIWRRYMQVRPENAEDYIELLVDLGYYTSAIKKYMEILDNSNFQSKKGKSHFQLWSEMV
ELLVNKAKHIDTTANGGINVESIIRSGISRFSDQRGRLWVGLATYWITKGNFEKARDIFE
EGITSVMTVRDFTMIFDSYVEFEESIIGTLMSQAETRSKKGKVDEDADFDLDLRMLRFEQ
LMDRRPFLVNDVLLRQNPNNVVEWEKRVALWGNNVSEVVSTYTAAIAAINPKKAHGKFHE
LWVNYAKFYENGGNINTARIIFDKAVKVPFKTVAELAETWCEWAEMELRNENFDQAVAIM
AKATQAPKRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVGTLDETRKIYDRIFELRI
ATPQTVVNYANLLEENKYFEESYKVYERGLDLFSYPVAFELWNLYLTKAVDRKVSVERLR
DLFEQALDGCPPKFAKVLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRLEMFNFYIT
KSASNFGLTSTRPIYERAIAALPDHEAKDMCLKFAEMERRLGEIDRARAIYGHASQFCDP
RTNAGFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQQRAQNG
ETDAKDEENDQERADTMAALERQARAPVGFVAASTGPEGGNRPSAAATTAPPANVNPDAI
DINDEDMED
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgccaggggccttattgcctcctagatcgcagcgacatcacgcacagatggagcgaacg
tcagcagcagagccagacctctacctcatctcgagtgaggatactatctatgagcaggat
ctgctgcgggatcccggcagtatcaagccatggctgtcttacatcgagtacaagcgccag
aatgggacgctttacgagcagtcttttatcatggagcgcgcctgcaaacaacttccgcga
tcttacaaactgtggaagatgtatttagaattcagaatcaaccatctccgtggacgcaat
tctgccatacatcgtgctgaatatcagaaagtgaatgcgctatttgaacgagcccttgtg
ctactcaacaagatgcctcggatctgggagatgttcctctctttcctgctgaagcaacca
ctggttacatacactcgtcgctcatttgatcgtgcgcttcgagcactccctataacccag
cacggccgtatttggaaactgtacaagtcatttgccaactctgtctctgggtttaccgcg
gtccaaatatggcggagatacatgcaggttcgtcccgagaatgcggaagactacatcgaa
ctgctcgtggacttgggatattacacatctgctatcaagaagtacatggaaattctcgac
aactcgaatttccagtcaaagaagggcaagagccatttccaactatggagcgagatggtt
gagcttctggtgaacaaggctaaacacattgacaccacagccaacgggggaattaacgtt
gaatctatcattcggagcggtatttctcgattctctgatcaacgtggtagactatgggtc
ggcctggcgacgtattggatcacgaaaggcaactttgagaaagccagagatatctttgaa
gaaggaataacaagcgtcatgacagtacgggacttcaccatgatattcgattcttatgtc
gagtttgaggagtcaatcatcggaacactcatgagtcaagcagaaactcggtcgaaaaaa
ggcaaggtcgatgaggatgcagattttgacctagatctgcgcatgttgcgattcgaacag
ttaatggatagacgcccattccttgtcaacgatgttctcctccgacaaaacccgaacaac
gttgtggaatgggagaagcgagtcgcactgtggggaaacaatgtcagcgaagtcgtcagt
acgtacaccgctgctattgcagctatcaaccccaagaaggcacatggaaagttccacgaa
ctgtgggtgaattacgccaaattctatgagaatggaggaaatattaatactgcacgaatc
atcttcgacaaggctgtgaaagtacccttcaaaacagtagcagagttggcggagacgtgg
tgtgaatgggccgagatggaattgcgtaatgaaaacttcgatcaggctgttgctatcatg
gccaaggcgactcaggcacccaagcggtcgacggtggactattttgacgagactctatcg
ccccaacaacgtgtacacaagagctggaagctttggagtttctacgtggaccttgttgag
agtgttggtacccttgacgagaccaggaagatctacgacaggatcttcgagcttcgaatt
gcgaccccacagaccgttgtcaactacgccaatcttttggaagaaaacaagtatttcgaa
gagtcttacaaggtttacgagcgtggattggacttgttcagctaccccgtggcattcgag
ctttggaatttgtacctgacgaaagcggtggaccggaaagtcagtgttgagcgactccgt
gatcttttcgagcaagcactggatggctgtcctcctaaattcgccaaggtattgtacttg
atgtatggcaacctggaagaagagcgtggacttgctagacacgctatgcgtatctatgaa
cgtgccacacgcgcagtgtcagacgaggaccgactcgaaatgttcaacttctacattaca
aagtccgcgtccaactttggtcttacatcaactcgcccaatctacgaacgtgccatcgcc
gctctaccggaccacgaagcgaaggatatgtgtttgaagtttgctgagatggaacgccga
cttggtgaaatcgaccgagcccgtgctatttacggccatgcctcccagttctgtgatccg
cgtaccaacgctggcttctggcagaaatgggaagcattcgaagtgcagcacggtaacgag
gatacgttcaaagaaatgttacgaatcaagcgaagtgttcaagctcaatacaacaccgat
gtcaacttcatcgcctcccaggccatcgcacgcagccaacaacagcgcgcacaaaacgga
gaaacagacgccaaggacgaagaaaatgaccaagaacgcgcagatacaatggcagcattg
gaacgtcaagctcgtgctcccgtcggcttcgttgctgctagcaccggacctgaaggcggt
aaccggccttcagcagctgcgactaccgcgccacctgcgaatgtcaatccggatgctatt
gatatcaatgatgaggacatggaagattag
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